myRT

myRT report for GCA_003981395.1_ASM398139v1

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Seq: PNSG01000166.1 (1286 bp)
Overview 1 RT 1: 93-1038 bp Neighborhood of RT #1 [93, 1283] RVT-GII GIIM Feature: gene Location: 93-1283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-765 bp Feature: domain Description: GIIM Note: maturase Location: 840-1038 bp Feature: domain Description: GIIM Note: maturase Location: 840-1 038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PNSG01000012.1 (112993 bp)
Overview 1 RT 1: 109749-112301 bp Neighborhood of RT #1 [109749, 112339] Pox_D5 RVT-Retrons TIR_2 Feature: gene Location: 109749-109931 bp Feature: gene Location: 110318-110470 bp Feature: domain Description: Pox_D5 Location: 110321-110444 bp Feature: domain Description: Pox_D5 Location: 11032 1-110444 bp Feature: gene Location: 110708-112339 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 111023-111620 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11102 3-11162 0 bp Feature: domain Description: TIR_2 Location: 111944-112301 bp Feature: domain Description: TIR_2 Location: 111944-112 301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pox_D5 (pfam03288), RVT-Retrons, TIR_2 (pfam13676)

Seq: PNSG01000182.1 (991 bp)
Overview 1 RT 1: 1-990 bp Neighborhood of RT #1 [1, 989] RVT-GII Feature: gene Location: 1-363 bp Feature: gene Location: 657-989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PNSG01000016.1 (100969 bp)
Overview 1 RT 1: 2-8052 bp Neighborhood of RT #1 [2, 8063] RVT-UG8 INT_Rci_Hp1_C INT_P4_C mutS1 Feature: gene Location: 2-175 bp Feature: gene Location: 602-2620 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1172-1622 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1172-1622 bp Feature: gene Location: 3876-5336 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4251-4458 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4 251-4 4 58 bp Feature: domain Description: INT_P4_C Location: 4677-5214 bp Feature: domain Description: INT_P4 _C Location: 4 677-5214 bp Feature: gene Location: 5481-8063 bp Feature: domain Description: mutS1 Location: 5532-8052 bp Feature: domain Description: mutS1 Location: 5532-8052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), mutS1 (TIGR01070)