myRT

myRT report for GCA_003981445.1_ASM398144v1

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Seq: PNSK01000181.1 (2954 bp)
Overview 1 RT 1: 477-2769 bp Neighborhood of RT #1 [477, 2951] RVT-UG17 DUF4094 Peptidase_S74 Feature: gene Location: 477-1847 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 705-1311 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 705-1 31 1 bp Feature: gene Location: 1955-2242 bp Feature: gene Location: 2268-2951 bp Feature: domain Description: DUF4094 Location: 2304-2394 bp Feature: domain Description: DUF4094 Location: 2304-2394 bp Feature: domain Description: Peptidase_S74 Location: 2610-2769 bp Feature: domain Description: Peptidase_S74 Location: 261 0-2769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, DUF4094 (pfam13334), Peptidase_S74 (pfam13884)

Seq: PNSK01000296.1 (598 bp)
Overview 1 RT 1: 4-514 bp Neighborhood of RT #1 [4, 582] RVT_N RVT-GII Feature: gene Location: 4-582 bp Feature: domain Description: RVT_N Location: 130-367 bp Feature: domain Description: RVT_N Location: 130-367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418-514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418-514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: PNSK01000163.1 (4203 bp)
Overview 1 RT 1: 1958-4142 bp Neighborhood of RT #1 [1958, 4177] DUF1380 RVT-GII GIIM HNHc Feature: gene Location: 1958-2380 bp Feature: domain Description: DUF1380 Location: 1961-2255 bp Feature: domain Description: DUF13 80 Location: 1961-2255 bp Feature: gene Location: 2432-2767 bp Feature: gene Location: 2882-4177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2927-3488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2927-3 488 bp Feature: domain Description: GIIM Note: maturase Location: 3539-3773 bp Feature: domain Description: GIIM Note: maturase Location: 3 53 9-3 773 bp Feature: domain Description: HNHc Note: nucleases Location: 3983-4142 bp Feature: domain Description: HNHc Note: nucleases Location: 3 983 -4142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT-GII, GIIM (pfam08388), HNHc (smart00507)