myRT

myRT report for GCA_003981655.1_ASM398165v1

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Seq: PNZB01000016.1 (99105 bp)
Overview 1 RT 1: 90933-99096 bp Neighborhood of RT #1 [90933, 99096] mutS1 INT_Rci_Hp1_C INT_P4_C RVT-UG8 Feature: gene Location: 90933-93515 bp Feature: domain Description: mutS1 Location: 90984-93504 bp Feature: domain Description: mutS1 Location: 90984-93504 bp Feature: gene Location: 93660-95120 bp Feature: domain Description: INT_Rci_Hp1_C Location: 94035-94242 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 94035-94242 bp Feature: domain Description: INT_P4_C Location: 94461-94998 bp Feature: domain Description: INT_P4_C Location: 94461 -94998 bp Feature: gene Location: 96376-98394 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 96946-97396 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 96946-97396 bp Feature: gene Location: 98821-99096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mutS1 (TIGR01070), INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), RVT-UG8

Seq: PNZB01000113.1 (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PNZB01000033.1 (44443 bp)
Overview 1 RT 1: 345-3243 bp Neighborhood of RT #1 [345, 3243] RVT-Retrons TIR_2 Pox_D5 Feature: gene Location: 345-479 bp Feature: gene Location: 655-2286 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 970-1567 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 970-1567 bp Feature: domain Description: TIR_2 Location: 1891-2248 bp Feature: domain Description: TIR_2 Location: 1891-2248 bp Feature: gene Location: 2524-2676 bp Feature: domain Description: Pox_D5 Location: 2527-2650 bp Feature: domain Description: Pox_D5 Location: 2527-2650 bp Feature: gene Location: 3061-3243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR_2 (pfam13676), Pox_D5 (pfam03288)