myRT

myRT report for GCA_003981735.1_ASM398173v1

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Seq: PNSY01000033.1 (44531 bp)
Overview 1 RT 1: 345-3244 bp Neighborhood of RT #1 [345, 3244] RVT-Retrons TIR_2 Pox_D5 Feature: gene Location: 345-479 bp Feature: gene Location: 655-2286 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 970-1567 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 970-1 567 bp Feature: domain Description: TIR_2 Location: 1891-2248 bp Feature: domain Description: TIR_2 Location: 1 891 -2248 bp Feature: gene Location: 2524-2676 bp Feature: domain Description: Pox_D5 Location: 2527-2650 bp Feature: domain Description: Pox_D5 Location: 2527-2650 bp Feature: gene Location: 3062-3244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR_2 (pfam13676), Pox_D5 (pfam03288)

Seq: PNSY01000017.1 (101932 bp)
Overview 1 RT 1: 93760-101923 bp Neighborhood of RT #1 [93760, 101923] mutS1 INT_Rci_Hp1_C INT_P4_C RVT-UG8 Feature: gene Location: 93760-96342 bp Feature: domain Description: mutS1 Location: 93811-96331 bp Feature: domain Description: mutS1 Location: 93811-96331 bp Feature: gene Location: 96487-97947 bp Feature: domain Description: INT_Rci_Hp1_C Location: 96862-97069 bp Feature: domain Description: INT_Rci_Hp1_C Location: 96862 -97069 bp Feature: domain Description: INT_P4_C Location: 97288-97825 bp Feature: domain Description: INT_P4_C Location: 972 88-9782 5 bp Feature: gene Location: 99203-101221 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 99773-100223 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 99773-1002 2 3 bp Feature: gene Location: 101648-101923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mutS1 (TIGR01070), INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), RVT-UG8

Seq: PNSY01000105.1 (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)