myRT

myRT report for GCA_003981765.1_ASM398176v1

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Seq: PNTB01000034.1 (44432 bp)
Overview 1 RT 1: 41288-43839 bp Neighborhood of RT #1 [41288, 43877] Pox_D5 RVT-Retrons TIR_2 Feature: gene Location: 41288-41470 bp Feature: gene Location: 41856-42008 bp Feature: domain Description: Pox_D5 Location: 41859-41982 bp Feature: domain Description: Pox_D5 Location: 41 859-41 982 bp Feature: gene Location: 42246-43877 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42561-43158 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42561 -431 58 bp Feature: domain Description: TIR_2 Location: 43482-43839 bp Feature: domain Description: TIR_2 Location: 43482-43839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pox_D5 (pfam03288), RVT-Retrons, TIR_2 (pfam13676)

Seq: PNTB01000110.1 (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PNTB01000016.1 (101689 bp)
Overview 1 RT 1: 10-8162 bp Neighborhood of RT #1 [10, 8173] RVT-UG8 INT_Rci_Hp1_C INT_P4_C mutS1 Feature: gene Location: 10-285 bp Feature: gene Location: 712-2730 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1282-1732 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1282-173 2 bp Feature: gene Location: 3986-5446 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4361-4568 bp Feature: domain Description: INT_Rci_Hp1_C Location: 43 61-4568 bp Feature: domain Description: INT_P4_C Location: 4787-5324 bp Feature: domain Description: INT_P4_C Location: 4787-53 24 bp Feature: gene Location: 5591-8173 bp Feature: domain Description: mutS1 Location: 5642-8162 bp Feature: domain Description: mutS1 Location: 5642-8162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), mutS1 (TIGR01070)