myRT

myRT report for GCA_003982165.1_ASM398216v1

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Seq: POAQ01000021.1 (82862 bp)
Overview 1 RT 1: 67-7958 bp Neighborhood of RT #1 [67, 7969] RVT-UG8 INT_Rci_Hp1_C INT_P4_C mutS1 Feature: gene Location: 67-270 bp Feature: gene Location: 509-2527 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1079-1529 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 079-1 529 bp Feature: gene Location: 3782-5242 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4157-4364 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 41 57-4364 bp Feature: domain Description: INT_P4_C Location: 4583-5120 bp Feature: domain Description: INT_P4_C Location: 4583-51 20 bp Feature: gene Location: 5387-7969 bp Feature: domain Description: mutS1 Location: 5438-7958 bp Feature: domain Description: mutS1 Location: 5438-7958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), mutS1 (TIGR01070)

Seq: POAQ01000002.1 (235791 bp)
Overview 1 RT 1: 233183-235789 bp Neighborhood of RT #1 [233183, 235789] PHA02517 RVT-GII GIIM Feature: gene Location: 233183-233398 bp Feature: gene Location: 233453-233893 bp Feature: domain Description: PHA02517 Location: 233456-233864 bp Feature: domain Description: PHA02 517 Location: 2 33456-2 33864 bp Feature: gene Location: 234022-235545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 234295-235027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 342 95-2 3502 7 bp Feature: domain Description: GIIM Note: maturase Location: 235102-235300 bp Feature: domain Description: GIIM Note: maturase Location: 2 35102 -2 35300 bp Feature: gene Location: 235499-235789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)