myRT

myRT report for GCA_003982645.1_ASM398264v1

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Seq: PNVA01000049.1 (11008 bp)
Overview 1 RT 1: 6583-10820 bp Neighborhood of RT #1 [6583, 10885] HTH_ARAC PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 6583-7392 bp Feature: domain Description: HTH_ARAC Location: 7129-7372 bp Feature: domain Description: HTH_ARAC Location: 71 29-7372 bp Feature: gene Location: 7776-8192 bp Feature: domain Description: PHA02517 Location: 7779-8181 bp Feature: domain Description: PHA0251 7 Location: 7779-81 81 bp Feature: gene Location: 8345-9868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8618-9350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 861 8-9350 bp Feature: domain Description: GIIM Note: maturase Location: 9425-9623 bp Feature: domain Description: GIIM Note: maturase Location: 9425-9623 bp Feature: gene Location: 9822-10247 bp Feature: gene Location: 10460-10885 bp Feature: domain Description: PHA02517 Location: 10484-10820 bp Feature: domain Description: PHA0251 7 Location: 1 0484-1 0820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARAC (smart00342), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: PNVA01000001.1 (450362 bp)
Overview 1 RT 1: 161166-165526 bp Neighborhood of RT #1 [161166, 165549] HTH_XRE RVT-Retrons PRK13889 TraD Feature: gene Location: 161166-161381 bp Feature: gene Location: 161472-161753 bp Feature: domain Description: HTH_XRE Location: 161487-161652 bp Feature: domain Description: HTH_XRE Location: 161487-161652 bp Feature: gene Location: 161746-162846 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 161887-162439 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 161887-162 439 bp Feature: gene Location: 162923-164425 bp Feature: domain Description: PRK13889 Location: 162926-163508 bp Feature: domain Description: PRK13889 Location: 162 92 6-163508 bp Feature: gene Location: 165238-165549 bp Feature: domain Description: TraD Location: 165352-165526 bp Feature: domain Description: TraD Location: 165352 -16552 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional), TraD (pfam06412)

Seq: PNVA01000003.1 (287036 bp)
Overview 1 RT 1: 22516-28524 bp Neighborhood of RT #1 [22516, 28541] proA PRK09692 RVT-UG7 Psu Feature: gene Location: 22516-23769 bp Feature: domain Description: proA Location: 22543-23734 bp Feature: domain Description: proA Location: 22543 -23 73 4 bp Feature: gene Location: 24124-25308 bp Feature: domain Description: PRK09692 Location: 24130-25285 bp Feature: domain Description: PRK09692 Location: 2413 0-25285 bp Feature: gene Location: 25301-26929 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 25709-26138 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 25709-2613 8 bp Feature: gene Location: 26926-27666 bp Feature: gene Location: 27969-28541 bp Feature: domain Description: Psu Location: 27987-28524 bp Feature: domain Description: Psu Location: 27987-28524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)