myRT

myRT report for GCA_003982675.1_ASM398267v1

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Seq: PNVC01000069.1 (16879 bp)
Overview 1 RT 1: 4682-8320 bp Neighborhood of RT #1 [4682, 8487] InsE PHA02517 RVT-GII RVT-GII GIIM PHA02517 COG2085 Feature: gene Location: 4682-4984 bp Feature: domain Description: InsE Location: 4721-4970 bp Feature: domain Description: InsE Location: 4721 -4970 bp Feature: gene Location: 5040-5465 bp Feature: domain Description: PHA02517 Location: 5064-5400 bp Feature: domain Description: PHA0251 7 Location: 5064-5400 bp Feature: gene Location: 6057-6752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6330-6726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6330-6726 bp Feature: gene Location: 6746-7579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6752-7061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6752-7061 bp Feature: domain Description: GIIM Note: maturase Location: 7136-7355 bp Feature: domain Description: GIIM Note: maturase Location: 71 36-7355 bp Feature: gene Location: 7732-7908 bp Feature: domain Description: PHA02517 Location: 7735-7837 bp Feature: domain Description: PHA0251 7 Location: 7735-7837 bp Feature: gene Location: 8074-8487 bp Feature: domain Description: COG2085 Location: 8173-8320 bp Feature: domain Description: COG2085 Location: 81 73-8320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: PNVC01000057.1 (30295 bp)
Overview 1 RT 1: 18865-22224 bp Neighborhood of RT #1 [18865, 22229] PRK09413 RVT-GII RVT-GII GIIM PinE Feature: gene Location: 18865-19062 bp Feature: domain Description: PRK09413 Location: 18868-19030 bp Feature: domain Description: PRK09413 Location: 18868-19030 bp Feature: gene Location: 19117-19467 bp Feature: gene Location: 19538-19951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19859-19946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19859-19946 bp Feature: gene Location: 20015-20890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20021-20477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 002 1-2 0477 bp Feature: domain Description: GIIM Note: maturase Location: 20525-20756 bp Feature: domain Description: GIIM Note: maturase Location: 2 052 5-2 0756 bp Feature: gene Location: 21099-21500 bp Feature: gene Location: 21600-22229 bp Feature: domain Description: PinE Location: 21675-22224 bp Feature: domain Description: PinE Location: 2 1675-2 2 2 2 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII, GIIM (pfam08388), PinE (COG1961)

Seq: PNVC01000013.1 (109470 bp)
Overview 1 RT 1: 102994-109025 bp Neighborhood of RT #1 [102994, 109025] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 102994-103914 bp Feature: domain Description: AbiEii Location: 103036-103777 bp Feature: domain Description: AbiEii Location: 103 03 6-103 777 bp Feature: gene Location: 103901-104704 bp Feature: domain Description: AbiEi_3_N Location: 103934-104195 bp Feature: domain Description: AbiEi_3 _N Location: 103 93 4-104195 bp Feature: domain Description: AbiEi_3 Location: 104207-104663 bp Feature: domain Description: AbiEi_3 Location: 104207-104663 bp Feature: gene Location: 104999-108208 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 105527-106016 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 105527-106016 bp Feature: domain Description: nitrilase Location: 107522-108119 bp Feature: domain Description: nitrilase Location: 107522-108119 bp Feature: gene Location: 108369-108509 bp Feature: domain Description: Phage_ASH Location: 108396-108489 bp Feature: domain Description: Phage_ASH Location: 1083 96-108489 bp Feature: gene Location: 108555-109025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)