myRT

myRT report for GCA_003983815.1_ASM398381v1

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Seq: PNVB01000118.1 (2271 bp)
Overview 1 RT 1: 92-2268 bp Neighborhood of RT #1 [92, 2268] RVT-GII GIIM Feature: gene Location: 92-1615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1 097 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1370 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 72-1 370 bp Feature: gene Location: 1909-2268 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PNVB01000021.1 (79098 bp)
Overview 1 RT 1: 345-3245 bp Neighborhood of RT #1 [345, 3245] RVT-Retrons TIR_2 Pox_D5 Feature: gene Location: 345-479 bp Feature: gene Location: 655-2286 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 970-1567 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 970-1567 bp Feature: domain Description: TIR_2 Location: 1891-2248 bp Feature: domain Description: TIR_2 Location: 1891-2 2 48 bp Feature: gene Location: 2524-2676 bp Feature: domain Description: Pox_D5 Location: 2527-2650 bp Feature: domain Description: Pox_D5 Location: 2 52 7-2 650 bp Feature: gene Location: 3063-3245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR_2 (pfam13676), Pox_D5 (pfam03288)

Seq: PNVB01000016.1 (98534 bp)
Overview 1 RT 1: 3-8341 bp Neighborhood of RT #1 [3, 8352] PHA02517 RVT-UG8 INT_Rci_Hp1_C INT_P4_C mutS1 Feature: gene Location: 3-452 bp Feature: domain Description: PHA02517 Location: 9-444 bp Feature: domain Description: PHA02517 Location: 9-444 bp Feature: gene Location: 891-2909 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1461-1911 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1461-1911 bp Feature: gene Location: 4165-5625 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4540-4747 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4540-4747 bp Feature: domain Description: INT_P4_C Location: 4966-5503 bp Feature: domain Description: INT_P4_C Location: 4966-5503 bp Feature: gene Location: 5770-8352 bp Feature: domain Description: mutS1 Location: 5821-8341 bp Feature: domain Description: mutS1 Location: 5821-83 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-UG8, INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), mutS1 (TIGR01070)