myRT

myRT report for GCA_003983855.1_ASM398385v1

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Seq: PNZP01000044.1 (29649 bp)
Overview 1 RT 1: 14647-19932 bp Neighborhood of RT #1 [14647, 19949] InsE PHA02517 RVT-GII GIIM PHA02517 LysM IAT_beta PRK15318 Invasin_D3 Feature: gene Location: 14647-14931 bp Feature: domain Description: InsE Location: 14659-14920 bp Feature: domain Description: InsE Location: 1 4659-1 4920 bp Feature: gene Location: 14973-15398 bp Feature: domain Description: PHA02517 Location: 14994-15333 bp Feature: domain Description: PHA0251 7 Location: 1 4994-1 5333 bp Feature: gene Location: 15990-17513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16263-16995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6263-1 6995 bp Feature: domain Description: GIIM Note: maturase Location: 17070-17268 bp Feature: domain Description: GIIM Note: maturase Location: 1 7070-1 7268 bp Feature: gene Location: 17636-18070 bp Feature: domain Description: PHA02517 Location: 17639-18062 bp Feature: domain Description: PHA0251 7 Location: 1 7639-1 8062 bp Feature: gene Location: 18072-19949 bp Feature: domain Description: LysM Location: 18312-18450 bp Feature: domain Description: LysM Location: 1 831 2-1 8450 bp Feature: domain Description: IAT_beta Location: 18531-19356 bp Feature: domain Description: IAT_beta Location: 1 8531 -1 9356 bp Feature: domain Description: PRK15318 Location: 19557-19680 bp Feature: domain Description: PRK1 531 8 Location: 1 9557-1 9680 bp Feature: domain Description: Invasin_D3 Location: 19695-19932 bp Feature: domain Description: Invasin_D3 Location: 1 9695-1 9932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), LysM (smart00257), IAT_beta (pfam11924), PRK15318 (intimin-like protein SinH; Provisional), Invasin_D3 (pfam09134)

Seq: PNZP01000134.1 (1691 bp)
Overview 1 RT 1: 521-1297 bp Neighborhood of RT #1 [521, 1689] RVT-UG17 RVT-UG17 Feature: gene Location: 521-1210 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 749-1181 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 749-1181 bp Feature: gene Location: 1171-1689 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1180-1297 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1180-12 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17

Seq: PNZP01000120.1 (1914 bp)
Overview 1 RT 1: 105-1912 bp Neighborhood of RT #1 [105, 1912] RVT-GII GIIM Feature: gene Location: 105-1436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-1077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 90-1077 bp Feature: domain Description: GIIM Note: maturase Location: 1194-1362 bp Feature: domain Description: GIIM Note: maturase Location: 1194-13 62 bp Feature: gene Location: 1447-1719 bp Feature: gene Location: 1769-1912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PNZP01000086.1 (3817 bp)
Overview 1 RT 1: 83-3608 bp Neighborhood of RT #1 [83, 3608] Antirestrict DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 83-508 bp Feature: domain Description: Antirestrict Location: 218-506 bp Feature: domain Description: Antirestrict Location: 218-506 bp Feature: gene Location: 555-977 bp Feature: domain Description: DUF1380 Location: 558-855 bp Feature: domain Description: DUF1380 Location: 558-855 bp Feature: gene Location: 1479-3146 bp Feature: domain Description: RVT_N Location: 1527-1764 bp Feature: domain Description: RVT_N Location: 1527-1764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1815-2457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1815-24 57 bp Feature: domain Description: GIIM Note: maturase Location: 2508-2742 bp Feature: domain Description: GIIM Note: maturase Location: 2508-274 2 bp Feature: domain Description: HNHc Note: nucleases Location: 2952-3111 bp Feature: domain Description: HNHc Note: nucleases Location: 2952-3111 bp Feature: gene Location: 3426-3608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)