myRT

myRT report for GCA_003985225.1_ASM398522v1

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Seq: RXPN01000040.1 (27051 bp)
Overview 1 RT 1: 13201-18459 bp Neighborhood of RT #1 [13201, 18464] HTH_38 Tra8 PHA02517 RVT-GII GIIM PHA02517 fruct_sucro_rep Feature: gene Location: 13201-14352 bp Feature: domain Description: HTH_38 Location: 13216-13324 bp Feature: domain Description: HTH_38 Location: 1 321 6-1 3324 bp Feature: domain Description: Tra8 Location: 13360-14341 bp Feature: domain Description: Tra8 Location: 1 3360-1 4341 bp Feature: gene Location: 14501-14911 bp Feature: domain Description: PHA02517 Location: 14507-14846 bp Feature: domain Description: PHA0251 7 Location: 1 4507-1 4846 bp Feature: gene Location: 15503-17026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15776-16508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5776-1 6508 bp Feature: domain Description: GIIM Note: maturase Location: 16583-16781 bp Feature: domain Description: GIIM Note: maturase Location: 1 6583-1 6781 bp Feature: gene Location: 17184-17348 bp Feature: domain Description: PHA02517 Location: 17223-17316 bp Feature: domain Description: PHA0251 7 Location: 1 7223-1 731 6 bp Feature: gene Location: 17460-18464 bp Feature: domain Description: fruct_sucro_rep Location: 17481-18459 bp Feature: domain Description: fruct_sucro_rep Location: 1 7481 -1 8459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), fruct_sucro_rep (TIGR02417)

Seq: RXPN01000008.1 (209287 bp)
Overview 1 RT 1: 107128-110592 bp Neighborhood of RT #1 [107128, 110603] PRK10819 PRK11370 RVT-UG2 PRK09678 Feature: gene Location: 107128-107871 bp Feature: domain Description: PRK10819 Location: 107140-107869 bp Feature: domain Description: PRK10819 Location: 107140-107869 bp Feature: gene Location: 108074-108370 bp Feature: domain Description: PRK11370 Location: 108077-108368 bp Feature: domain Description: PRK11370 Location: 108077-108368 bp Feature: gene Location: 108609-109898 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 108810-109602 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 108810-109602 bp Feature: gene Location: 110044-110190 bp Feature: gene Location: 110382-110603 bp Feature: domain Description: PRK09678 Location: 110385-110592 bp Feature: domain Description: PRK09678 Location: 110385-110592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10819 (transport protein TonB; Provisional), PRK11370 (YciI family protein), RVT-UG2, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: RXPN01000011.1 (189080 bp)
Overview 1 RT 1: 139711-143237 bp Neighborhood of RT #1 [139711, 143239] RVT-Retrons DinI Feature: gene Location: 139711-139923 bp Feature: gene Location: 140402-140833 bp Feature: gene Location: 140972-141922 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 141152-141695 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 141152-141695 bp Feature: gene Location: 142245-142643 bp Feature: gene Location: 142826-143239 bp Feature: domain Description: DinI Location: 143054-143237 bp Feature: domain Description: DinI Location: 143 054-143 23 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DinI (pfam06183)

Seq: RXPN01000045.1 (18726 bp)
Overview 1 RT 1: 15166-18337 bp Neighborhood of RT #1 [15166, 18339] PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 15166-15849 bp Feature: domain Description: PRK10276 Location: 15469-15832 bp Feature: domain Description: PRK10276 Location: 154 69-15832 bp Feature: gene Location: 15903-16505 bp Feature: gene Location: 16480-17490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16486-17098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164 86-17098 bp Feature: gene Location: 17642-17917 bp Feature: domain Description: InsA Location: 17645-17909 bp Feature: domain Description: InsA Location: 1764 5-17909 bp Feature: gene Location: 17836-18339 bp Feature: domain Description: DDE_Tnp_IS1 Location: 17947-18337 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1794 7-18337 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)