myRT

myRT report for GCA_003988975.1_ASM398897v1

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Seq: PJQN01000047.1 (11085 bp)
Overview 1 RT 1: 363-6324 bp Neighborhood of RT #1 [363, 6347] RVT-UG5 PRK04247 HsdS RMtype1_S_Eco2747I-TRD2-CR2_like RMtype1_S_Eco2747I-TRD2-CR2_like Feature: gene Location: 363-3380 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 861-1356 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 861 -1 356 bp Feature: gene Location: 3560-4660 bp Feature: domain Description: PRK04247 Location: 3623-3851 bp Feature: domain Description: PRK04247 Location: 3623-3851 bp Feature: gene Location: 4671-6347 bp Feature: domain Description: HsdS Location: 4677-5010 bp Feature: domain Description: HsdS Location: 4677-501 0 bp Feature: domain Description: RMtype1_S_Eco2747I-TRD2-CR2_like Location: 5244-5463 bp Feature: domain Description: RMtype1 _S_Eco2747I-TRD2-CR2_like Location: 5244-5463 bp Feature: domain Description: RMtype1_S_Eco2747I-TRD2-CR2_like Location: 5763-6324 bp Feature: domain Description: RMtype1 _S_Eco2747I-TRD2-CR2_like Location: 5763-6324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, PRK04247 (endonuclease NucS), HsdS (COG0732), RMtype1_S_Eco2747I-TRD2-CR2_like (cd17247)

Seq: PJQN01000058.1 (6371 bp)
Overview 1 RT 1: 3-2293 bp Neighborhood of RT #1 [3, 2298] RVT-Retrons DUF4756 Feature: gene Location: 3-419 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 171-417 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 171-417 bp Feature: gene Location: 706-1584 bp Feature: gene Location: 1819-2298 bp Feature: domain Description: DUF4756 Location: 1822-2293 bp Feature: domain Description: DUF4756 Location: 182 2 -2 2 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DUF4756 (pfam15948)

Seq: PJQN01000043.1 (15537 bp)
Overview 1 RT 1: 5108-8956 bp Neighborhood of RT #1 [5108, 8956] HHA RVT-GII INT_Cre_C Feature: gene Location: 5108-5359 bp Feature: domain Description: HHA Location: 5156-5339 bp Feature: domain Description: HHA Location: 5156-53 3 9 bp Feature: gene Location: 5654-5866 bp Feature: gene Location: 5941-7230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6268-6799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6268-6799 bp Feature: gene Location: 7437-8573 bp Feature: domain Description: INT_Cre_C Location: 7860-8514 bp Feature: domain Description: INT_Cre_C Location: 7860-8514 bp Feature: gene Location: 8639-8956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)