myRT

myRT report for GCA_003990085.1_ASM399008v1

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Seq: RZGU01000051.1 (2121 bp)
Overview 1 RT 1: 199-2098 bp Neighborhood of RT #1 [199, 2118] RVT-GII GIIM InsE Feature: gene Location: 199-1443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-1060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-1 060 bp Feature: domain Description: GIIM Note: maturase Location: 1141-1357 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 41 -1 357 bp Feature: gene Location: 1502-1738 bp Feature: gene Location: 1975-2118 bp Feature: domain Description: InsE Location: 1984-2098 bp Feature: domain Description: InsE Location: 1 984-2098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: RZGU01000003.1 (217865 bp)
Overview 1 RT 1: 265-1931 bp Neighborhood of RT #1 [265, 1931] RVT-Retrons HipB Feature: gene Location: 265-1191 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 436-976 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 436-976 bp Feature: gene Location: 1154-1489 bp Feature: domain Description: HipB Location: 1178-1406 bp Feature: domain Description: HipB Location: 1178-1406 bp Feature: gene Location: 1668-1931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HipB (COG1396)

Seq: RZGU01000016.1 (96831 bp)
Overview 1 RT 1: 19581-22989 bp Neighborhood of RT #1 [19581, 23012] RVT-UG18 Gln_deamidase_2 Peptidase_M64 Feature: gene Location: 19581-19886 bp Feature: gene Location: 20035-20289 bp Feature: gene Location: 20338-20490 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 20341-20470 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 203 41-20470 bp Feature: gene Location: 20709-21566 bp Feature: domain Description: Gln_deamidase_2 Location: 21018-21351 bp Feature: domain Description: Gln_deamidase_2 Location: 21018-213 51 bp Feature: gene Location: 21627-23012 bp Feature: domain Description: Peptidase_M64 Location: 22203-22989 bp Feature: domain Description: Peptidase_M64 Location: 22203 -22989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18, Gln_deamidase_2 (pfam18626), Peptidase_M64 (pfam09471)

Seq: RZGU01000002.1 (233141 bp)
Overview 1 RT 1: 6513-9110 bp Neighborhood of RT #1 [6513, 9110] PHA02517 RVT-GII GIIM LdcA Feature: gene Location: 6513-6743 bp Feature: domain Description: PHA02517 Location: 6516-6717 bp Feature: domain Description: PHA02517 Location: 6516-6717 bp Feature: gene Location: 6767-6982 bp Feature: gene Location: 6963-7526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6969-7083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6969-7083 bp Feature: domain Description: GIIM Note: maturase Location: 7134-7368 bp Feature: domain Description: GIIM Note: maturase Location: 7134 -7368 bp Feature: gene Location: 7867-8841 bp Feature: domain Description: LdcA Location: 7879-8821 bp Feature: domain Description: LdcA Location: 7879-8821 bp Feature: gene Location: 8970-9110 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), LdcA (COG1619)

Seq: RZGU01000019.1 (83876 bp)
Overview 1 RT 1: 8775-14576 bp Neighborhood of RT #1 [8775, 14576] LysP RVT-UG18 Feature: gene Location: 8775-10232 bp Feature: domain Description: LysP Location: 8817-10185 bp Feature: domain Description: LysP Location: 8817-10185 bp Feature: gene Location: 10583-11509 bp Feature: gene Location: 11903-12322 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 11909-12170 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 11909-12170 bp Feature: gene Location: 12417-12590 bp Feature: gene Location: 12840-14576 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysP (COG0833), RVT-UG18