myRT

myRT report for GCA_003998075.1_ASM399807v1

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Seq: RZSA01000462.1 (5027 bp)
Overview 1 RT 1: 2-2858 bp Neighborhood of RT #1 [2, 2911] DDE_5 RVT-GII COG3547 Feature: gene Location: 2-430 bp Feature: domain Description: DDE_5 Location: 47-431 bp Feature: domain Description: DDE_5 Location: 47-431 bp Feature: gene Location: 833-1072 bp Feature: gene Location: 1140-1697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1251-1596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 251 -1 596 bp Feature: gene Location: 1694-1867 bp Feature: gene Location: 2393-2911 bp Feature: domain Description: COG3547 Location: 2405-2858 bp Feature: domain Description: COG3547 Location: 2405-2858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_5 (pfam13546), RVT-GII, COG3547 (Transposase )

Seq: RZSA01000800.1 (3130 bp)
Overview 1 RT 1: 1-2970 bp Neighborhood of RT #1 [1, 3017] Resolvase arc_metj RVT-GII GIIM COG3547 Feature: gene Location: 1-468 bp Feature: domain Description: Resolvase Location: 13-454 bp Feature: domain Description: Resolvase Location: 13-454 bp Feature: gene Location: 615-944 bp Feature: domain Description: arc_metj Location: 810-930 bp Feature: domain Description: arc_metj Location: 810-930 bp Feature: gene Location: 1061-1684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1064-1307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1064-1307 bp Feature: domain Description: GIIM Note: maturase Location: 1379-1592 bp Feature: domain Description: GIIM Note: maturase Location: 1379-1592 bp Feature: gene Location: 1719-3017 bp Feature: domain Description: COG3547 Location: 2004-2970 bp Feature: domain Description: COG3547 Location: 2 004-2 970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), arc_metj (LOAD_arc_metj), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: RZSA01001415.1 (1188 bp)
Overview 1 RT 1: 2-1185 bp Neighborhood of RT #1 [2, 1185] COG3547 RVT-GII RVT-GII Feature: gene Location: 2-196 bp Feature: domain Description: COG3547 Location: 32-197 bp Feature: domain Description: COG3 547 Location: 3 2-197 bp Feature: gene Location: 268-672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 550-667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 550-667 bp Feature: gene Location: 742-933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748-913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748-913 bp Feature: gene Location: 961-1185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII