myRT

myRT report for GCA_003998845.1_ASM399884v1

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Seq: RZOJ01000034.1 (30316 bp)
Overview 1 RT 1: 11136-15979 bp 2 RT 2: 22585-26390 bp Neighborhood of RT #1 [11136, 15987] TroA_e RVT-GII AccC Neighborhood of RT #2 [22585, 26404] Phage_int_SAM_1 INT_RitC_C_like RVT-GII GIIM DadA Feature: gene Location: 11136-12191 bp Feature: domain Description: TroA_e Location: 11238-12087 bp Feature: domain Description: TroA_e Location: 1 1 238-1 2087 bp Feature: gene Location: 12372-12914 bp Feature: gene Location: 12700-14175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13108-13798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 08-1 3798 bp Feature: gene Location: 14183-14530 bp Feature: gene Location: 14767-15987 bp Feature: domain Description: AccC Location: 14770-15979 bp Feature: domain Description: AccC Location: 1 4770-1 5979 bp Feature: gene Location: 22585-23553 bp Feature: domain Description: Phage_int_SAM_1 Location: 22600-22849 bp Feature: domain Description: Phage_int_SAM_1 Location: 22600-22849 bp Feature: domain Description: INT_RitC_C_like Location: 22936-23479 bp Feature: domain Description: INT_RitC_C_like Location: 22936-23479 bp Feature: gene Location: 23636-23905 bp Feature: gene Location: 23984-24667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24011-24215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2401 1 -2421 5 bp Feature: domain Description: GIIM Note: maturase Location: 24284-24500 bp Feature: domain Description: GIIM Note: maturase Location: 24284-24500 bp Feature: gene Location: 25151-25288 bp Feature: gene Location: 25169-26404 bp Feature: domain Description: DadA Location: 25181-26390 bp Feature: domain Description: DadA Location: 251 81 -26390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TroA_e (cd01142), RVT-GII, AccC (COG0439), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), GIIM (pfam08388), DadA (COG0665)

Seq: RZOJ01000001.1 (93527 bp)
Overview 1 RT 1: 25661-30854 bp Neighborhood of RT #1 [25661, 30904] YtcJ RVT-GII GIIM DDE_Tnp_IS66 Transposase_20 Feature: gene Location: 25661-27328 bp Feature: domain Description: YtcJ Location: 25664-27326 bp Feature: domain Description: YtcJ Location: 2 5664-2 732 6 bp Feature: gene Location: 27752-27970 bp Feature: gene Location: 28032-29294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28248-28902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 82 48-2 8902 bp Feature: domain Description: GIIM Note: maturase Location: 28986-29208 bp Feature: domain Description: GIIM Note: maturase Location: 2 8986-2 92 08 bp Feature: gene Location: 29976-30335 bp Feature: domain Description: DDE_Tnp_IS66 Location: 30075-30156 bp Feature: domain Description: DDE_Tnp_IS66 Location: 30075-30156 bp Feature: gene Location: 30611-30904 bp Feature: domain Description: Transposase_20 Location: 30668-30854 bp Feature: domain Description: Transposase_2 0 Location: 30668-30854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YtcJ (COG1574), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), Transposase_20 (pfam02371)