myRT

myRT report for GCA_004001365.1_ASM400136v1

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Seq: RPHK01000026.1 (87474 bp)
Overview 1 RT 1: 33146-38919 bp Neighborhood of RT #1 [33146, 38921] MarR Phage_int_SAM_5 INT_Rci_Hp1_C RVT-AbiP2 TrkG Feature: gene Location: 33146-33508 bp Feature: domain Description: MarR Location: 33212-33482 bp Feature: domain Description: MarR Location: 3321 2-33482 bp Feature: gene Location: 33547-34560 bp Feature: domain Description: Phage_int_SAM_5 Location: 33781-33979 bp Feature: domain Description: Phage_int_SAM_5 Location: 33781 -33979 bp Feature: domain Description: INT_Rci_Hp1_C Location: 34012-34477 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 3401 2-34477 bp Feature: gene Location: 34756-36252 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 35173-35626 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 351 73-35626 bp Feature: gene Location: 36774-37364 bp Feature: gene Location: 37449-38921 bp Feature: domain Description: TrkG Location: 37482-38919 bp Feature: domain Description: TrkG Location: 37482-3891 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MarR (pfam01047), Phage_int_SAM_5 (pfam13102), INT_Rci_Hp1_C (cd00796), RVT-AbiP2, TrkG (COG0168)

Seq: RPHK01000036.1 (65814 bp)
Overview 1 RT 1: 62554-65083 bp Neighborhood of RT #1 [62554, 65169] COG3335 RVT-GII GIIM Feature: gene Location: 62554-62769 bp Feature: gene Location: 63341-63814 bp Feature: domain Description: COG3335 Location: 63419-63803 bp Feature: domain Description: COG3335 Location: 63419-63803 bp Feature: gene Location: 63910-65169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64126-64780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6412 6-64780 bp Feature: domain Description: GIIM Note: maturase Location: 64861-65083 bp Feature: domain Description: GIIM Note: maturase Location: 64861-65083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3335 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: RPHK01000091.1 (11309 bp)
Overview 1 RT 1: 9148-11212 bp Neighborhood of RT #1 [9148, 11292] CoxS Cyc7 RVT-GII XthA LTXXQ Feature: gene Location: 9148-9600 bp Feature: domain Description: CoxS Location: 9157-9595 bp Feature: domain Description: CoxS Location: 9157-9595 bp Feature: gene Location: 9613-10035 bp Feature: domain Description: Cyc7 Location: 9727-10024 bp Feature: domain Description: Cyc7 Location: 9727-10024 bp Feature: gene Location: 10301-10480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10307-10379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 07-103 79 bp Feature: gene Location: 10579-10998 bp Feature: domain Description: XthA Location: 10906-10996 bp Feature: domain Description: XthA Location: 10906-10996 bp Feature: gene Location: 11056-11292 bp Feature: domain Description: LTXXQ Location: 11080-11212 bp Feature: domain Description: LTXXQ Location: 11080-11212 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CoxS (COG2080), Cyc7 (COG3474), RVT-GII, XthA (COG0708), LTXXQ (pfam07813)