myRT

myRT report for GCA_004001585.1_ASM400158v1

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Seq: RPIA01000034.1 (70573 bp)
Overview 1 RT 1: 66193-70449 bp Neighborhood of RT #1 [66193, 70449] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII RVT-GII Feature: gene Location: 66193-66543 bp Feature: domain Description: TnpB_IS66 Location: 66220-66505 bp Feature: domain Description: TnpB_IS66 Location: 66220-66505 bp Feature: gene Location: 66598-68190 bp Feature: domain Description: LZ_Tnp_IS66 Location: 66715-66946 bp Feature: domain Description: LZ_Tnp_IS66 Location: 6671 5-66946 bp Feature: domain Description: zf-IS66 Location: 66973-67099 bp Feature: domain Description: zf-IS66 Location: 66973-67099 bp Feature: domain Description: DDE_Tnp_IS66 Location: 67162-68029 bp Feature: domain Description: DDE_Tnp_IS66 Location: 671 62-68029 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 68050-68161 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 68050-681 61 bp Feature: gene Location: 68292-69323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69030-69198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69030-691 98 bp Feature: gene Location: 69197-70114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69218-69719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6921 8-6971 9 bp Feature: gene Location: 70162-70449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RPIA01000077.1 (30785 bp)
Overview 1 RT 1: 28173-30774 bp Neighborhood of RT #1 [28173, 30774] Transposase_mut RVT-GII Feature: gene Location: 28173-28619 bp Feature: domain Description: Transposase_mut Location: 28176-28533 bp Feature: domain Description: Transposase_mut Location: 2 8176-2 8533 bp Feature: gene Location: 28887-29075 bp Feature: gene Location: 29081-30490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29435-30122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9435-3012 2 bp Feature: gene Location: 30487-30774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RPIA01000007.1 (160350 bp)
Overview 1 RT 1: 146032-153768 bp Neighborhood of RT #1 [146032, 154508] COG3547 RVT-Retrons UvrD UvrD UvrD YbjD YbjD Feature: gene Location: 146032-146265 bp Feature: gene Location: 146567-147589 bp Feature: domain Description: COG3547 Location: 146585-147545 bp Feature: domain Description: COG3 547 Location: 146585-147545 bp Feature: gene Location: 147971-149704 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 148106-148733 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 148106-14873 3 bp Feature: gene Location: 150283-152160 bp Feature: domain Description: UvrD Location: 150370-150598 bp Feature: domain Description: UvrD Location: 1503 70-150598 bp Feature: domain Description: UvrD Location: 150679-151237 bp Feature: domain Description: UvrD Location: 150679-15123 7 bp Feature: domain Description: UvrD Location: 151840-152065 bp Feature: domain Description: UvrD Location: 151840-152065 bp Feature: gene Location: 152157-154508 bp Feature: domain Description: YbjD Location: 152160-152331 bp Feature: domain Description: YbjD Location: 152160-1523 3 1 bp Feature: domain Description: YbjD Location: 152772-153768 bp Feature: domain Description: YbjD Location: 152772-153 768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RPIA01000141.1 (1923 bp)
Overview 1 RT 1: 178-1351 bp Neighborhood of RT #1 [178, 1437] RVT-GII GIIM Feature: gene Location: 178-1437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394 -104 8 bp Feature: domain Description: GIIM Note: maturase Location: 1129-1351 bp Feature: domain Description: GIIM Note: maturase Location: 1129-1351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT