myRT

myRT report for GCA_004001635.1_ASM400163v1

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Seq: RPHT01000024.1 (92227 bp)
Overview 1 RT 1: 48618-54367 bp Neighborhood of RT #1 [48618, 54393] TrkG RVT-AbiP2 Phage_int_SAM_5 INT_Rci_Hp1_C MarR Feature: gene Location: 48618-50090 bp Feature: domain Description: TrkG Location: 48651-50088 bp Feature: domain Description: TrkG Location: 48651 -50088 bp Feature: gene Location: 50175-50765 bp Feature: gene Location: 51287-52783 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 51704-52157 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 51 704-521 57 bp Feature: gene Location: 52979-53992 bp Feature: domain Description: Phage_int_SAM_5 Location: 53213-53411 bp Feature: domain Description: Phage_int_SAM_5 Location: 5321 3-5341 1 bp Feature: domain Description: INT_Rci_Hp1_C Location: 53444-53909 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 53444-53909 bp Feature: gene Location: 54031-54393 bp Feature: domain Description: MarR Location: 54097-54367 bp Feature: domain Description: MarR Location: 54097-54367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrkG (COG0168), RVT-AbiP2, Phage_int_SAM_5 (pfam13102), INT_Rci_Hp1_C (cd00796), MarR (pfam01047)

Seq: RPHT01000121.1 (2082 bp)
Overview 1 RT 1: 178-1351 bp Neighborhood of RT #1 [178, 1437] RVT-GII GIIM Feature: gene Location: 178-1437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1048 bp Feature: domain Description: GIIM Note: maturase Location: 1129-1351 bp Feature: domain Description: GIIM Note: maturase Location: 112 9-1351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RPHT01000094.1 (11309 bp)
Overview 1 RT 1: 9148-11212 bp Neighborhood of RT #1 [9148, 11292] CoxS Cyc7 RVT-GII XthA LTXXQ Feature: gene Location: 9148-9600 bp Feature: domain Description: CoxS Location: 9157-9595 bp Feature: domain Description: CoxS Location: 9157-9595 bp Feature: gene Location: 9613-10035 bp Feature: domain Description: Cyc7 Location: 9727-10024 bp Feature: domain Description: Cyc7 Location: 9727-10024 bp Feature: gene Location: 10301-10480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10307-10379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 07-103 79 bp Feature: gene Location: 10579-10998 bp Feature: domain Description: XthA Location: 10906-10996 bp Feature: domain Description: XthA Location: 10906-10996 bp Feature: gene Location: 11056-11292 bp Feature: domain Description: LTXXQ Location: 11080-11212 bp Feature: domain Description: LTXXQ Location: 11080-11212 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CoxS (COG2080), Cyc7 (COG3474), RVT-GII, XthA (COG0708), LTXXQ (pfam07813)