myRT

myRT report for GCA_004001665.1_ASM400166v1

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Seq: RPIC01000094.1 (18346 bp)
Overview 1 RT 1: 6024-9888 bp Neighborhood of RT #1 [6024, 9923] Transposase_mut RVT-GII HTH_Tnp_1 TnpB_IS66 Feature: gene Location: 6024-6947 bp Feature: domain Description: Transposase_mut Location: 6033-6861 bp Feature: domain Description: Transposase_mut Location: 6033-6861 bp Feature: gene Location: 7058-7519 bp Feature: gene Location: 7771-9180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8125-8812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 25-881 2 bp Feature: gene Location: 9319-9582 bp Feature: domain Description: HTH_Tnp_1 Location: 9325-9466 bp Feature: domain Description: HTH_Tnp_1 Location: 9325-9466 bp Feature: gene Location: 9651-9923 bp Feature: domain Description: TnpB_IS66 Location: 9663-9888 bp Feature: domain Description: TnpB_IS66 Location: 9663-9888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), RVT-GII, HTH_Tnp_1 (pfam01527), TnpB_IS66 (pfam05717)

Seq: RPIC01000118.1 (7199 bp)
Overview 1 RT 1: 2722-6457 bp Neighborhood of RT #1 [2722, 6457] RVT-GII GIIM COG5489 Feature: gene Location: 2722-2898 bp Feature: gene Location: 3169-3345 bp Feature: gene Location: 3720-5081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4047-4662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4047-4662 bp Feature: domain Description: GIIM Note: maturase Location: 4716-4932 bp Feature: domain Description: GIIM Note: maturase Location: 4716-4932 bp Feature: gene Location: 5511-5834 bp Feature: domain Description: COG5489 Location: 5517-5832 bp Feature: domain Description: COG5489 Location: 5517-5832 bp Feature: gene Location: 6188-6457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG5489 (Uncharacterized conserved protein, DUF736 family )

Seq: RPIC01000086.1 (22723 bp)
Overview 1 RT 1: 2-2084 bp Neighborhood of RT #1 [2, 2089] RVT-GII GIIM PRK12687 PRK12687 Feature: gene Location: 2-148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-140 bp Feature: gene Location: 260-643 bp Feature: domain Description: GIIM Note: maturase Location: 278-494 bp Feature: domain Description: GIIM Note: maturase Location: 278-494 bp Feature: gene Location: 902-2089 bp Feature: domain Description: PRK12687 Location: 905-1511 bp Feature: domain Description: PRK12687 Location: 905-1511 bp Feature: domain Description: PRK12687 Location: 1760-2084 bp Feature: domain Description: PRK12687 Location: 1760-2084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK12687 (flagellin; Reviewed)

Seq: RPIC01000135.1 (4020 bp)
Overview 1 RT 1: 217-3289 bp Neighborhood of RT #1 [217, 3375] RVT-GII RVT-GII GIIM Feature: gene Location: 217-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 544-1234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54 4 -1234 bp Feature: gene Location: 2116-3375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2332-2986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2332-2986 bp Feature: domain Description: GIIM Note: maturase Location: 3067-3289 bp Feature: domain Description: GIIM Note: maturase Location: 3067-3289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)