myRT

myRT report for GCA_004001675.1_ASM400167v1

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Seq: RPHW01000208.1 (2739 bp)
Overview 1 RT 1: 3-2735 bp Neighborhood of RT #1 [3, 2737] DDE_3 RVT-GII GIIM COG3415 Feature: gene Location: 3-380 bp Feature: domain Description: DDE_3 Location: 18-375 bp Feature: domain Description: DDE_3 Location: 1 8-375 bp Feature: gene Location: 476-1735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692-1346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692-1 346 bp Feature: domain Description: GIIM Note: maturase Location: 1427-1649 bp Feature: domain Description: GIIM Note: maturase Location: 1 427-1 649 bp Feature: gene Location: 2330-2737 bp Feature: domain Description: COG3415 Location: 2333-2735 bp Feature: domain Description: COG341 5 Location: 2333-2735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388), COG3415 (Transposase )

Seq: RPHW01000234.1 (1345 bp)
Overview 1 RT 1: 3-1035 bp Neighborhood of RT #1 [3, 1184] RVT-GII GIIM Feature: gene Location: 3-1184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147-765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147-765 bp Feature: domain Description: GIIM Note: maturase Location: 819-1035 bp Feature: domain Description: GIIM Note: maturase Location: 819-1035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RPHW01000171.1 (6967 bp)
Overview 1 RT 1: 1956-6909 bp Neighborhood of RT #1 [1956, 6965] VbhA caca2 RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 1956-2381 bp Feature: domain Description: VbhA Location: 2010-2103 bp Feature: domain Description: VbhA Location: 2010-2103 bp Feature: gene Location: 2676-3785 bp Feature: domain Description: caca2 Location: 2703-3774 bp Feature: domain Description: caca2 Location: 2703 -3 774 bp Feature: gene Location: 4003-5826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4741-5431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4741-543 1 bp Feature: gene Location: 5929-6186 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5935-6028 bp Feature: domain Description: DDE_Tnp_IS66 Location: 593 5-6028 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 6046-6157 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 6046-6157 bp Feature: gene Location: 6228-6965 bp Feature: domain Description: LZ_Tnp_IS66 Location: 6264-6336 bp Feature: domain Description: LZ_Tnp_IS66 Location: 6264-63 3 6 bp Feature: domain Description: zf-IS66 Location: 6363-6489 bp Feature: domain Description: zf-IS66 Location: 63 63 -6489 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6552-6909 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6552-6909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VbhA (pfam18495), caca2 (TIGR00846), RVT-GII, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005)

Seq: RPHW01000104.1 (22342 bp)
Overview 1 RT 1: 1431-6115 bp Neighborhood of RT #1 [1431, 6115] PhdYeFM_antitox RVT-UG7 STKc_PknB_like Feature: gene Location: 1431-1709 bp Feature: domain Description: PhdYeFM_antitox Location: 1440-1638 bp Feature: domain Description: PhdYeFM_antitox Location: 14 4 0-1638 bp Feature: gene Location: 1712-2311 bp Feature: gene Location: 2739-4280 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3111-3531 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3111-3531 bp Feature: gene Location: 4630-5667 bp Feature: domain Description: STKc_PknB_like Location: 4690-5449 bp Feature: domain Description: STKc_PknB_like Location: 4 690-54 4 9 bp Feature: gene Location: 5660-6115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhdYeFM_antitox (pfam02604), RVT-UG7, STKc_PknB_like (cd14014)