myRT

myRT report for GCA_004001925.1_ASM400192v1

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Seq: RPIQ01000031.1 (59415 bp)
Overview 1 RT 1: 1-2147 bp Neighborhood of RT #1 [1, 2263] RVT-GII AraJ HTH_ARSR Feature: gene Location: 1-441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-442 bp Feature: gene Location: 618-1802 bp Feature: domain Description: AraJ Location: 621-1779 bp Feature: domain Description: AraJ Location: 621 -1 779 bp Feature: gene Location: 1892-2263 bp Feature: domain Description: HTH_ARSR Location: 1949-2147 bp Feature: domain Description: HTH_ARSR Location: 1 949-21 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AraJ (COG2814), HTH_ARSR (smart00418)

Seq: RPIQ01000245.1 (4144 bp)
Overview 1 RT 1: 2363-4143 bp Neighborhood of RT #1 [2363, 4143] RVT-GII GIIM Feature: gene Location: 2363-2503 bp Feature: gene Location: 2500-2649 bp Feature: gene Location: 2710-3969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2926-3577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 92 6-3577 bp Feature: domain Description: GIIM Note: maturase Location: 3661-3883 bp Feature: domain Description: GIIM Note: maturase Location: 3661-3883 bp Feature: gene Location: 3994-4143 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RPIQ01000244.1 (4148 bp)
Overview 1 RT 1: 3-3184 bp Neighborhood of RT #1 [3, 3294] PRK07574 RVT-GII Transposase_mut DUF772 Feature: gene Location: 3-227 bp Feature: domain Description: PRK07574 Location: 6-180 bp Feature: domain Description: PRK07574 Location: 6-180 bp Feature: gene Location: 570-1718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 822-1467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 822-1467 bp Feature: gene Location: 2345-2725 bp Feature: domain Description: Transposase_mut Location: 2348-2645 bp Feature: domain Description: Transposase_mut Location: 23 48-2645 bp Feature: gene Location: 2806-3294 bp Feature: domain Description: DUF772 Location: 2965-3184 bp Feature: domain Description: DUF772 Location: 2965-3 184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07574 (NAD-dependent formate dehydrogenase), RVT-GII, Transposase_mut (pfam00872), DUF772 (pfam05598)

Seq: RPIQ01000216.1 (6617 bp)
Overview 1 RT 1: 3267-6467 bp Neighborhood of RT #1 [3267, 6616] PRK12687 PRK12687 PRK12687 RVT-GII GIIM Feature: gene Location: 3267-4232 bp Feature: domain Description: PRK12687 Location: 3270-4227 bp Feature: domain Description: PRK12687 Location: 3270-4 227 bp Feature: gene Location: 4547-5734 bp Feature: domain Description: PRK12687 Location: 4550-5156 bp Feature: domain Description: PRK12687 Location: 4 550-5156 bp Feature: domain Description: PRK12687 Location: 5405-5729 bp Feature: domain Description: PRK12687 Location: 54 05-5729 bp Feature: gene Location: 5993-6616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5999-6197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5999-6197 bp Feature: domain Description: GIIM Note: maturase Location: 6251-6467 bp Feature: domain Description: GIIM Note: maturase Location: 6251-64 67 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12687 (flagellin; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: RPIQ01000288.1 (2082 bp)
Overview 1 RT 1: 646-1819 bp Neighborhood of RT #1 [646, 1905] RVT-GII GIIM Feature: gene Location: 646-1905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 862-1516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 862-15 16 bp Feature: domain Description: GIIM Note: maturase Location: 1597-1819 bp Feature: domain Description: GIIM Note: maturase Location: 15 97-1819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)