myRT

myRT report for GCA_004002015.1_ASM400201v1

Download annotations/find similar RTs

Seq: RPIV01000029.1 (59790 bp)
Overview 1 RT 1: 2168-10809 bp Neighborhood of RT #1 [2168, 10847] Phd HATPase_c_3 RVT-UG5 SH3_3 YegI Feature: gene Location: 2168-2458 bp Feature: domain Description: Phd Location: 2192-2315 bp Feature: domain Description: Phd Location: 21 92-231 5 bp Feature: gene Location: 2818-4836 bp Feature: domain Description: HATPase_c_3 Location: 2893-3217 bp Feature: domain Description: HATPase_c_3 Location: 2893-321 7 bp Feature: gene Location: 5164-8181 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5659-6130 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5659-61 30 bp Feature: gene Location: 8265-8927 bp Feature: domain Description: SH3_3 Location: 8757-8910 bp Feature: domain Description: SH3_3 Location: 8757-891 0 bp Feature: gene Location: 8931-10847 bp Feature: domain Description: YegI Location: 8952-10809 bp Feature: domain Description: YegI Location: 8952-1 0809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phd (COG4118), HATPase_c_3 (pfam13589), RVT-UG5, SH3_3 (pfam08239), YegI (COG4248)

Seq: RPIV01000154.1 (11755 bp)
Overview 1 RT 1: 2838-5890 bp Neighborhood of RT #1 [2838, 5890] RVT-GII Feature: gene Location: 2838-3110 bp Feature: gene Location: 3325-3468 bp Feature: gene Location: 3572-5395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4310-5000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4310-5000 bp Feature: gene Location: 5426-5596 bp Feature: gene Location: 5696-5890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RPIV01000010.1 (89983 bp)
Overview 1 RT 1: 27596-32530 bp Neighborhood of RT #1 [27596, 32530] MalK RpiR RVT-GII Feature: gene Location: 27596-28786 bp Feature: domain Description: MalK Location: 27611-28625 bp Feature: domain Description: MalK Location: 27611-28625 bp Feature: gene Location: 28927-29721 bp Feature: domain Description: RpiR Location: 28957-29695 bp Feature: domain Description: RpiR Location: 28957-29695 bp Feature: gene Location: 30630-32039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30984-31671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 0984-3 1671 bp Feature: gene Location: 32045-32233 bp Feature: gene Location: 32291-32530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MalK (COG3839), RpiR (COG1737), RVT-GII

Seq: RPIV01000241.1 (1534 bp)
Overview 1 RT 1: 2-1530 bp Neighborhood of RT #1 [2, 1532] RVT-GII GIIM Feature: gene Location: 2-211 bp Feature: gene Location: 474-1532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 714-1329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 714 -1329 bp Feature: domain Description: GIIM Note: maturase Location: 1383-1530 bp Feature: domain Description: GIIM Note: maturase Location: 1383-1530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)