myRT

myRT report for GCA_004002465.1_ASM400246v1

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Seq: RPKZ01000102.1 (22705 bp)
Overview 1 RT 1: 19355-22555 bp Neighborhood of RT #1 [19355, 22704] PRK12687 PRK12687 PRK12687 RVT-GII GIIM Feature: gene Location: 19355-20320 bp Feature: domain Description: PRK12687 Location: 19358-20315 bp Feature: domain Description: PRK1 2687 Location: 1 9358-2031 5 bp Feature: gene Location: 20635-21822 bp Feature: domain Description: PRK12687 Location: 20638-21244 bp Feature: domain Description: PRK1 2687 Location: 20638-21 244 bp Feature: domain Description: PRK12687 Location: 21493-21817 bp Feature: domain Description: PRK1 2687 Location: 21 493-21 81 7 bp Feature: gene Location: 22081-22704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22087-22285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22087-22285 bp Feature: domain Description: GIIM Note: maturase Location: 22339-22555 bp Feature: domain Description: GIIM Note: maturase Location: 22339-22555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12687 (flagellin; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: RPKZ01000003.1 (142808 bp)
Overview 1 RT 1: 140536-142806 bp Neighborhood of RT #1 [140536, 142805] AraJ RVT-GII Feature: gene Location: 140536-141720 bp Feature: domain Description: AraJ Location: 140539-141697 bp Feature: domain Description: AraJ Location: 140539-141697 bp Feature: gene Location: 141668-141958 bp Feature: gene Location: 142371-142805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142515-142806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142 515-142 806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraJ (COG2814), RVT-GII

Seq: RPKZ01000217.1 (1920 bp)
Overview 1 RT 1: 39-1467 bp Neighborhood of RT #1 [39, 1862] RVT-GII Feature: gene Location: 39-1862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RPKZ01000006.1 (112707 bp)
Overview 1 RT 1: 77570-84070 bp Neighborhood of RT #1 [77570, 84081] MhpC Ndh RVT-GII GIIM MscS QdoI Feature: gene Location: 77570-78400 bp Feature: domain Description: MhpC Location: 77576-78395 bp Feature: domain Description: MhpC Location: 77576-78395 bp Feature: gene Location: 78499-79704 bp Feature: domain Description: Ndh Location: 78505-79669 bp Feature: domain Description: Ndh Location: 78505-79669 bp Feature: gene Location: 80229-81488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80421-81042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 804 21-8104 2 bp Feature: domain Description: GIIM Note: maturase Location: 81090-81297 bp Feature: domain Description: GIIM Note: maturase Location: 81090-81297 bp Feature: gene Location: 82543-83574 bp Feature: domain Description: MscS Location: 82678-83503 bp Feature: domain Description: MscS Location: 82678-83503 bp Feature: gene Location: 83647-84081 bp Feature: domain Description: QdoI Location: 83704-84070 bp Feature: domain Description: QdoI Location: 83704 -84 070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), Ndh (COG1252), RVT-GII, GIIM (pfam08388), MscS (COG0668), QdoI (COG1917)

Seq: RPKZ01000207.1 (2701 bp)
Overview 1 RT 1: 1-2698 bp Neighborhood of RT #1 [1, 2698] HTH_Tnp_1 RVT-GII Feature: gene Location: 1-144 bp Feature: gene Location: 392-655 bp Feature: domain Description: HTH_Tnp_1 Location: 398-539 bp Feature: domain Description: HTH_Tnp_1 Location: 398-5 39 bp Feature: gene Location: 794-2203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1148-1835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1148-1835 bp Feature: gene Location: 2483-2698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-GII