myRT

myRT report for GCA_004002615.1_ASM400261v1

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Seq: RPKC01000230.1 (1885 bp)
Overview 1 RT 1: 80-1790 bp Neighborhood of RT #1 [80, 1790] GIIM RVT-GII Feature: gene Location: 80-382 bp Feature: domain Description: GIIM Note: maturase Location: 83-293 bp Feature: domain Description: GIIM Note: maturase Location: 83-293 bp Feature: gene Location: 432-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 648-1302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 648-1 302 bp Feature: gene Location: 882-1790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII

Seq: RPKC01000235.1 (1634 bp)
Overview 1 RT 1: 1-1631 bp Neighborhood of RT #1 [1, 1633] RVT-GII Transposase_20 Feature: gene Location: 1-729 bp Feature: gene Location: 1265-1633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1295-1409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 95-1409 bp Feature: domain Description: Transposase_20 Location: 1418-1631 bp Feature: domain Description: Transposase_2 0 Location: 1418-1631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Transposase_20 (pfam02371)

Seq: RPKC01000028.1 (67315 bp)
Overview 1 RT 1: 11966-17789 bp Neighborhood of RT #1 [11966, 17800] RVT-GII RVT-GII GIIM PRK09356 hutH Feature: gene Location: 11966-12115 bp Feature: gene Location: 12240-12902 bp Feature: gene Location: 13400-14035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13727-13880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 727-13 880 bp Feature: gene Location: 14123-14818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14129-14399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14129-143 99 bp Feature: domain Description: GIIM Note: maturase Location: 14453-14666 bp Feature: domain Description: GIIM Note: maturase Location: 14453 -14666 bp Feature: gene Location: 14898-16268 bp Feature: domain Description: PRK09356 Location: 15057-16260 bp Feature: domain Description: PRK093 56 Location: 15057-16260 bp Feature: gene Location: 16265-17800 bp Feature: domain Description: hutH Location: 16274-17789 bp Feature: domain Description: hutH Location: 16274-17789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK09356 (imidazolonepropionase; Validated), hutH (TIGR01225)

Seq: RPKC01000210.1 (3360 bp)
Overview 1 RT 1: 1-2735 bp Neighborhood of RT #1 [1, 2735] RVT-GII LysR Feature: gene Location: 1-1197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142-829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 2-829 bp Feature: gene Location: 1316-2206 bp Feature: domain Description: LysR Location: 1328-2198 bp Feature: domain Description: LysR Location: 1328-2198 bp Feature: gene Location: 2391-2735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LysR (COG0583)