myRT

myRT report for GCA_004003165.1_ASM400316v1

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Seq: RPKU01000180.1 (1836 bp)
Overview 1 RT 1: 2-1599 bp Neighborhood of RT #1 [2, 1748] RVT-GII GIIM Feature: gene Location: 2-211 bp Feature: gene Location: 474-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 714-1329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 4-1 329 bp Feature: domain Description: GIIM Note: maturase Location: 1383-1599 bp Feature: domain Description: GIIM Note: maturase Location: 1 383-1 599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RPKU01000031.1 (61673 bp)
Overview 1 RT 1: 4029-12670 bp Neighborhood of RT #1 [4029, 12708] Phd HATPase_c_3 RVT-UG5 SH3_3 YegI Feature: gene Location: 4029-4319 bp Feature: domain Description: Phd Location: 4053-4176 bp Feature: domain Description: Phd Location: 4053-4176 bp Feature: gene Location: 4679-6697 bp Feature: domain Description: HATPase_c_3 Location: 4754-5078 bp Feature: domain Description: HATPase_c_3 Location: 4754-5078 bp Feature: gene Location: 7025-10042 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 7520-7991 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 752 0-7991 bp Feature: gene Location: 10126-10788 bp Feature: domain Description: SH3_3 Location: 10618-10771 bp Feature: domain Description: SH3_3 Location: 10618-10771 bp Feature: gene Location: 10792-12708 bp Feature: domain Description: YegI Location: 10813-12670 bp Feature: domain Description: YegI Location: 10813-12 670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phd (COG4118), HATPase_c_3 (pfam13589), RVT-UG5, SH3_3 (pfam08239), YegI (COG4248)

Seq: RPKU01000136.1 (11755 bp)
Overview 1 RT 1: 2838-5890 bp Neighborhood of RT #1 [2838, 5890] RVT-GII Feature: gene Location: 2838-3110 bp Feature: gene Location: 3325-3468 bp Feature: gene Location: 3572-5395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4310-5000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 10-5000 bp Feature: gene Location: 5426-5596 bp Feature: gene Location: 5696-5890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RPKU01000014.1 (95396 bp)
Overview 1 RT 1: 62661-67434 bp Neighborhood of RT #1 [62661, 67595] RVT-GII RpiR MalK Feature: gene Location: 62661-62900 bp Feature: gene Location: 62958-63146 bp Feature: gene Location: 63152-64561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63506-64193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63506-64 193 bp Feature: gene Location: 65470-66264 bp Feature: domain Description: RpiR Location: 65500-66238 bp Feature: domain Description: RpiR Location: 65500-66238 bp Feature: gene Location: 66405-67595 bp Feature: domain Description: MalK Location: 66420-67434 bp Feature: domain Description: MalK Location: 664 20-674 34 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RpiR (COG1737), MalK (COG3839)