myRT

myRT report for GCA_004003395.1_ASM400339v1

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Seq: RPLX01000203.1 (1886 bp)
Overview 1 RT 1: 80-1253 bp Neighborhood of RT #1 [80, 1339] RVT-GII GIIM Feature: gene Location: 80-1339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296-950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296-950 bp Feature: domain Description: GIIM Note: maturase Location: 1031-1253 bp Feature: domain Description: GIIM Note: maturase Location: 1 031 -1 253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RPLX01000136.1 (13213 bp)
Overview 1 RT 1: 1152-6831 bp Neighborhood of RT #1 [1152, 7067] RVT-UG12 YjgR YjgR SIR2_2 Feature: gene Location: 1152-1508 bp Feature: gene Location: 1631-1906 bp Feature: gene Location: 2188-3897 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2545-2992 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2 545-2 992 bp Feature: gene Location: 3956-5671 bp Feature: domain Description: YjgR Location: 4139-4598 bp Feature: domain Description: YjgR Location: 4139-4598 bp Feature: domain Description: YjgR Location: 5210-5627 bp Feature: domain Description: YjgR Location: 52 10-562 7 bp Feature: gene Location: 5664-7067 bp Feature: domain Description: SIR2_2 Location: 6390-6831 bp Feature: domain Description: SIR2 _2 Location: 6390-6831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12, YjgR (COG0433), SIR2_2 (pfam13289)

Seq: RPLX01000196.1 (2250 bp)
Overview 1 RT 1: 3-2226 bp Neighborhood of RT #1 [3, 2249] RVT-GII AraJ Feature: gene Location: 3-725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330-726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 0-726 bp Feature: gene Location: 1194-2249 bp Feature: domain Description: AraJ Location: 1197-2226 bp Feature: domain Description: AraJ Location: 1197-2226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AraJ (COG2814)

Seq: RPLX01000116.1 (18460 bp)
Overview 1 RT 1: 16747-18195 bp Neighborhood of RT #1 [16747, 18359] Transposase_mut RVT-GII GIIM Feature: gene Location: 16747-16950 bp Feature: gene Location: 16953-17666 bp Feature: domain Description: Transposase_mut Location: 16956-17568 bp Feature: domain Description: Transposase_mut Location: 16956-17568 bp Feature: gene Location: 17763-18359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17772-17907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17772-17907 bp Feature: domain Description: GIIM Note: maturase Location: 17979-18195 bp Feature: domain Description: GIIM Note: maturase Location: 17979-18195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), RVT-GII, GIIM (pfam08388)

Seq: RPLX01000202.1 (1896 bp)
Overview 1 RT 1: 80-1893 bp Neighborhood of RT #1 [80, 1893] RVT-GII GIIM Feature: gene Location: 80-1339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296-947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296-947 bp Feature: domain Description: GIIM Note: maturase Location: 1031-1253 bp Feature: domain Description: GIIM Note: maturase Location: 1031-125 3 bp Feature: gene Location: 1555-1686 bp Feature: gene Location: 1756-1893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RPLX01000046.1 (52374 bp)
Overview 1 RT 1: 17189-23524 bp Neighborhood of RT #1 [17189, 23673] UvrD UvrD RVT-Retrons ZapB DDE_Tnp_IS66 DDE_Tnp_IS66 Feature: gene Location: 17189-18427 bp Feature: gene Location: 17624-18964 bp Feature: domain Description: UvrD Location: 17630-17981 bp Feature: domain Description: UvrD Location: 176 30-17981 bp Feature: domain Description: UvrD Location: 18599-18824 bp Feature: domain Description: UvrD Location: 18599-18824 bp Feature: gene Location: 19499-21232 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19634-20261 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 196 34-2026 1 bp Feature: gene Location: 21684-22004 bp Feature: gene Location: 22006-23673 bp Feature: domain Description: ZapB Location: 22081-22225 bp Feature: domain Description: ZapB Location: 22081-22225 bp Feature: domain Description: DDE_Tnp_IS66 Location: 22540-22765 bp Feature: domain Description: DDE_Tnp_IS6 6 Location: 22540-2276 5 bp Feature: domain Description: DDE_Tnp_IS66 Location: 23113-23524 bp Feature: domain Description: DDE_Tnp_IS6 6 Location: 23113-23524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrD (COG0210), RVT-Retrons, ZapB (pfam06005), DDE_Tnp_IS66 (pfam03050)

Seq: RPLX01000186.1 (4212 bp)
Overview 1 RT 1: 1978-4129 bp Neighborhood of RT #1 [1978, 4206] Transposase_mut RVT-GII Feature: gene Location: 1978-2607 bp Feature: domain Description: Transposase_mut Location: 2095-2578 bp Feature: domain Description: Transposase_mut Location: 2095-257 8 bp Feature: gene Location: 2747-2995 bp Feature: gene Location: 3187-4206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3490-4129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3490-4129 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), RVT-GII

Seq: RPLX01000131.1 (14590 bp)
Overview 1 RT 1: 8255-12667 bp Neighborhood of RT #1 [8255, 12667] RmlC PRK07574 RVT-GII Feature: gene Location: 8255-8758 bp Feature: domain Description: RmlC Location: 8303-8744 bp Feature: domain Description: RmlC Location: 8 303-8 744 bp Feature: gene Location: 9435-10640 bp Feature: domain Description: PRK07574 Location: 9444-10593 bp Feature: domain Description: PRK07574 Location: 9444-10593 bp Feature: gene Location: 10983-11888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10986-11637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1098 6-11637 bp Feature: gene Location: 11894-12343 bp Feature: gene Location: 12407-12667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RmlC (COG4101), PRK07574 (NAD-dependent formate dehydrogenase), RVT-GII