myRT

myRT report for GCA_004003445.1_ASM400344v1

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Seq: RPLZ01000251.1 (4129 bp)
Overview 1 RT 1: 1-1887 bp Neighborhood of RT #1 [1, 2141] RVT-GII PinE Feature: gene Location: 1-1179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94-784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94-784 bp Feature: gene Location: 1278-1433 bp Feature: gene Location: 1455-2141 bp Feature: domain Description: PinE Location: 1461-1887 bp Feature: domain Description: PinE Location: 1 461 -1 887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PinE (COG1961)

Seq: RPLZ01000293.1 (1885 bp)
Overview 1 RT 1: 80-1790 bp Neighborhood of RT #1 [80, 1790] GIIM RVT-GII Feature: gene Location: 80-382 bp Feature: domain Description: GIIM Note: maturase Location: 83-293 bp Feature: domain Description: GIIM Note: maturase Location: 83-2 93 bp Feature: gene Location: 432-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 648-1302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 648-1302 bp Feature: gene Location: 882-1790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII

Seq: RPLZ01000260.1 (3429 bp)
Overview 1 RT 1: 2-2069 bp Neighborhood of RT #1 [2, 2069] RVT-GII Transposase_20 Feature: gene Location: 2-370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 2-146 bp Feature: domain Description: Transposase_20 Location: 155-368 bp Feature: domain Description: Transposase_20 Location: 155-3 68 bp Feature: gene Location: 906-2483 bp Feature: gene Location: 1845-2069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Transposase_20 (pfam02371)

Seq: RPLZ01000045.1 (43565 bp)
Overview 1 RT 1: 42128-43564 bp Neighborhood of RT #1 [42128, 43563] RVT-GII Feature: gene Location: 42128-42430 bp Feature: gene Location: 42824-43108 bp Feature: gene Location: 43294-43563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43351-43564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 3351-4 3564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RPLZ01000139.1 (15899 bp)
Overview 1 RT 1: 11966-15573 bp Neighborhood of RT #1 [11966, 15573] RVT-GII rve Feature: gene Location: 11966-12115 bp Feature: gene Location: 12240-12902 bp Feature: gene Location: 13400-14029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13727-13883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13727-13883 bp Feature: gene Location: 14008-15312 bp Feature: domain Description: rve Location: 14500-14827 bp Feature: domain Description: rve Location: 145 00-14827 bp Feature: gene Location: 15373-15573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, rve (pfam00665)

Seq: RPLZ01000267.1 (3250 bp)
Overview 1 RT 1: 2-2625 bp Neighborhood of RT #1 [2, 2625] RVT-GII LysR Feature: gene Location: 2-1087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-719 bp Feature: gene Location: 1206-2096 bp Feature: domain Description: LysR Location: 1218-2088 bp Feature: domain Description: LysR Location: 1218-2088 bp Feature: gene Location: 2281-2625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LysR (COG0583)