myRT

myRT report for GCA_004003595.1_ASM400359v1

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Seq: RPMN01000405.1 (1681 bp)
Overview 1 RT 1: 2-1679 bp Neighborhood of RT #1 [2, 1679] RVT-GII Transposase_20 Feature: gene Location: 2-370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-1 46 bp Feature: domain Description: Transposase_20 Location: 155-368 bp Feature: domain Description: Transposase_20 Location: 1 55-368 bp Feature: gene Location: 906-1679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Transposase_20 (pfam02371)

Seq: RPMN01000419.1 (1384 bp)
Overview 1 RT 1: 646-1381 bp Neighborhood of RT #1 [646, 1383] RVT-GII Feature: gene Location: 646-1383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 862-1381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 862 -1381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RPMN01000318.1 (4044 bp)
Overview 1 RT 1: 1420-3675 bp Neighborhood of RT #1 [1420, 4043] LysR RVT-GII Feature: gene Location: 1420-1764 bp Feature: gene Location: 1949-2839 bp Feature: domain Description: LysR Location: 1961-2831 bp Feature: domain Description: LysR Location: 1961-283 1 bp Feature: gene Location: 2958-4043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2988-3675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2988-3 675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), RVT-GII

Seq: RPMN01000013.1 (67750 bp)
Overview 1 RT 1: 146-2429 bp Neighborhood of RT #1 [146, 2545] RVT-GII AraJ HTH_ARSR Feature: gene Location: 146-727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 476-698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 76-698 bp Feature: gene Location: 900-2084 bp Feature: domain Description: AraJ Location: 903-2061 bp Feature: domain Description: AraJ Location: 903-2061 bp Feature: gene Location: 2174-2545 bp Feature: domain Description: HTH_ARSR Location: 2231-2429 bp Feature: domain Description: HTH_ARSR Location: 2231-24 29 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AraJ (COG2814), HTH_ARSR (smart00418)

Seq: RPMN01000034.1 (43568 bp)
Overview 1 RT 1: 41752-43567 bp Neighborhood of RT #1 [41752, 43566] RVT-GII Feature: gene Location: 41752-42108 bp Feature: gene Location: 42405-42644 bp Feature: gene Location: 42931-43566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43171-43567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43171-435 67 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII