myRT

myRT report for GCA_004003765.1_ASM400376v1

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Seq: RPMK01000002.1 (131034 bp)
Overview 1 RT 1: 87790-91601 bp Neighborhood of RT #1 [87790, 91609] IS285 RVT-GII GIIM INT_RitA_C_like INT_RitA_C_like Feature: gene Location: 87790-88215 bp Feature: gene Location: 88205-88360 bp Feature: domain Description: IS285 Location: 88214-88322 bp Feature: domain Description: IS285 Location: 8821 4-88322 bp Feature: gene Location: 88931-90448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89234-89996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89234-89996 bp Feature: domain Description: GIIM Note: maturase Location: 90065-90335 bp Feature: domain Description: GIIM Note: maturase Location: 90065-90335 bp Feature: gene Location: 91059-91400 bp Feature: domain Description: INT_RitA_C_like Location: 91062-91383 bp Feature: domain Description: INT_RitA_C_like Location: 91 062-91 383 bp Feature: gene Location: 91397-91609 bp Feature: domain Description: INT_RitA_C_like Location: 91406-91601 bp Feature: domain Description: INT_RitA_C_like Location: 91 406-91 601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), RVT-GII, GIIM (pfam08388), INT_RitA_C_like (cd01188)

Seq: RPMK01000047.1 (41133 bp)
Overview 1 RT 1: 1-1792 bp Neighborhood of RT #1 [1, 1792] RVT-GII Feature: gene Location: 1-540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145-541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145-541 bp Feature: gene Location: 247-1173 bp Feature: gene Location: 1490-1792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RPMK01000257.1 (1547 bp)
Overview 1 RT 1: 548-1418 bp Neighborhood of RT #1 [548, 1546] RVT-GII Feature: gene Location: 548-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1418 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RPMK01000209.1 (6591 bp)
Overview 1 RT 1: 274-2170 bp Neighborhood of RT #1 [274, 2170] RVT-GII RVT-GII Feature: gene Location: 274-852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-4 87 bp Feature: gene Location: 849-1679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1203-1581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1203-1581 bp Feature: gene Location: 1685-1873 bp Feature: gene Location: 1931-2170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RPMK01000186.1 (8861 bp)
Overview 1 RT 1: 3828-7966 bp Neighborhood of RT #1 [3828, 7966] COG3436 RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 3828-4589 bp Feature: domain Description: COG3436 Location: 4077-4554 bp Feature: domain Description: COG3436 Location: 4077-45 5 4 bp Feature: gene Location: 4649-5296 bp Feature: gene Location: 5200-6360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5317-5971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 317-5 971 bp Feature: domain Description: GIIM Note: maturase Location: 6052-6268 bp Feature: domain Description: GIIM Note: maturase Location: 605 2-6268 bp Feature: gene Location: 6414-7475 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6447-7107 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6447-7107 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 7128-7245 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 7128-7245 bp Feature: gene Location: 7493-7966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3436 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)