myRT

myRT report for GCA_004003855.1_ASM400385v1

Download annotations/find similar RTs

Seq: RPMU01000124.1 (1084 bp)
Overview 1 RT 1: 1-871 bp Neighborhood of RT #1 [1, 1020] RVT-GII GIIM Feature: gene Location: 1-1020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-601 bp Feature: domain Description: GIIM Note: maturase Location: 655-871 bp Feature: domain Description: GIIM Note: maturase Location: 655-871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RPMU01000040.1 (55092 bp)
Overview 1 RT 1: 1-3488 bp Neighborhood of RT #1 [1, 3595] RVT-GII NorD MoxR Feature: gene Location: 1-444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331-445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331-445 bp Feature: gene Location: 877-2772 bp Feature: domain Description: NorD Location: 880-2767 bp Feature: domain Description: NorD Location: 880-2 767 bp Feature: gene Location: 2777-3595 bp Feature: domain Description: MoxR Location: 2819-3488 bp Feature: domain Description: MoxR Location: 2 819-3488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, NorD (COG4548), MoxR (COG0714)

Seq: RPMU01000036.1 (59332 bp)
Overview 1 RT 1: 3993-12633 bp Neighborhood of RT #1 [3993, 12671] Phd HATPase_c_3 RVT-UG5 SH3_3 YegI Feature: gene Location: 3993-4283 bp Feature: domain Description: Phd Location: 4017-4140 bp Feature: domain Description: Phd Location: 4017-4140 bp Feature: gene Location: 4642-6660 bp Feature: domain Description: HATPase_c_3 Location: 4717-5041 bp Feature: domain Description: HATPase_c_3 Location: 4717-5041 bp Feature: gene Location: 6988-10005 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 7483-7954 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 7483 -7954 bp Feature: gene Location: 10089-10751 bp Feature: domain Description: SH3_3 Location: 10581-10734 bp Feature: domain Description: SH3 _3 Location: 10581-1073 4 bp Feature: gene Location: 10755-12671 bp Feature: domain Description: YegI Location: 10776-12633 bp Feature: domain Description: YegI Location: 10776-1263 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phd (COG4118), HATPase_c_3 (pfam13589), RVT-UG5, SH3_3 (pfam08239), YegI (COG4248)

Seq: RPMU01000011.1 (142627 bp)
Overview 1 RT 1: 140536-142625 bp Neighborhood of RT #1 [140536, 142624] AraJ RVT-GII Feature: gene Location: 140536-141720 bp Feature: domain Description: AraJ Location: 140539-141697 bp Feature: domain Description: AraJ Location: 14 0539-14 1697 bp Feature: gene Location: 141668-141958 bp Feature: gene Location: 142274-142624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142514-142625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 2514 -14 2625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraJ (COG2814), RVT-GII

Seq: RPMU01000078.1 (19834 bp)
Overview 1 RT 1: 3-2913 bp Neighborhood of RT #1 [3, 2913] RVT-UG12 Feature: gene Location: 3-179 bp Feature: gene Location: 290-2032 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 638-1094 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 638-1094 bp Feature: gene Location: 2235-2648 bp Feature: gene Location: 2698-2913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12