myRT

myRT report for GCA_004003965.1_ASM400396v1

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Seq: RPNA01000001.1 (365943 bp)
Overview 1 RT 1: 3-1387 bp Neighborhood of RT #1 [3, 1872] RVT-GII rve Feature: gene Location: 3-221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-222 bp Feature: gene Location: 289-489 bp Feature: gene Location: 550-1872 bp Feature: domain Description: rve Location: 1060-1387 bp Feature: domain Description: rve Location: 1 060-1 387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, rve (pfam00665)

Seq: RPNA01000008.1 (170077 bp)
Overview 1 RT 1: 1-2067 bp Neighborhood of RT #1 [1, 2090] RVT-GII AraJ Feature: gene Location: 1-258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145-259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145-2 59 bp Feature: gene Location: 668-958 bp Feature: gene Location: 906-2090 bp Feature: domain Description: AraJ Location: 909-2067 bp Feature: domain Description: AraJ Location: 909-2 067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AraJ (COG2814)

Seq: RPNA01000029.1 (68635 bp)
Overview 1 RT 1: 54124-58266 bp Neighborhood of RT #1 [54124, 58266] TnpB_IS66 InsE RVT-GII COG1708 Feature: gene Location: 54124-54477 bp Feature: domain Description: TnpB_IS66 Location: 54151-54439 bp Feature: domain Description: TnpB_IS66 Location: 54151-5443 9 bp Feature: gene Location: 54458-54916 bp Feature: domain Description: InsE Location: 54503-54677 bp Feature: domain Description: InsE Location: 54503 -54677 bp Feature: gene Location: 55029-56852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55767-56457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55767-56457 bp Feature: gene Location: 56967-57587 bp Feature: domain Description: COG1708 Location: 57027-57393 bp Feature: domain Description: COG1708 Location: 57027-573 93 bp Feature: gene Location: 57598-58266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), InsE (COG2963), RVT-GII, COG1708 (Predicted nucleotidyltransferase )

Seq: RPNA01000121.1 (1897 bp)
Overview 1 RT 1: 1-1890 bp Neighborhood of RT #1 [1, 1895] RVT-GII GIIM DDE_3 Feature: gene Location: 1-1422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1033 bp Feature: domain Description: GIIM Note: maturase Location: 1114-1336 bp Feature: domain Description: GIIM Note: maturase Location: 1114 -1336 bp Feature: gene Location: 1518-1895 bp Feature: domain Description: DDE_3 Location: 1533-1890 bp Feature: domain Description: DDE_3 Location: 1533-1890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358)