myRT

myRT report for GCA_004004345.1_ASM400434v1

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Seq: RPNB01000033.1 (63035 bp)
Overview 1 RT 1: 4029-12670 bp Neighborhood of RT #1 [4029, 12708] Phd HATPase_c_3 RVT-UG5 SH3_3 YegI Feature: gene Location: 4029-4319 bp Feature: domain Description: Phd Location: 4053-4176 bp Feature: domain Description: Phd Location: 4053-41 76 bp Feature: gene Location: 4679-6697 bp Feature: domain Description: HATPase_c_3 Location: 4754-5078 bp Feature: domain Description: HATPase_c_3 Location: 4754-5078 bp Feature: gene Location: 7025-10042 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 7520-7991 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 7520-7991 bp Feature: gene Location: 10126-10788 bp Feature: domain Description: SH3_3 Location: 10618-10771 bp Feature: domain Description: SH3_3 Location: 1 061 8-1 0771 bp Feature: gene Location: 10792-12708 bp Feature: domain Description: YegI Location: 10813-12670 bp Feature: domain Description: YegI Location: 1 081 3-1 2670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phd (COG4118), HATPase_c_3 (pfam13589), RVT-UG5, SH3_3 (pfam08239), YegI (COG4248)

Seq: RPNB01000024.1 (94147 bp)
Overview 1 RT 1: 31760-36694 bp Neighborhood of RT #1 [31760, 36694] MalK RpiR RVT-GII Feature: gene Location: 31760-32950 bp Feature: domain Description: MalK Location: 31775-32789 bp Feature: domain Description: MalK Location: 31775-32 789 bp Feature: gene Location: 33091-33885 bp Feature: domain Description: RpiR Location: 33121-33859 bp Feature: domain Description: RpiR Location: 3312 1-33859 bp Feature: gene Location: 34794-36203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35148-35835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35148-35835 bp Feature: gene Location: 36209-36397 bp Feature: gene Location: 36455-36694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MalK (COG3839), RpiR (COG1737), RVT-GII

Seq: RPNB01000015.1 (144741 bp)
Overview 1 RT 1: 141943-144737 bp Neighborhood of RT #1 [141943, 144739] AraJ RVT-GII GIIM Feature: gene Location: 141943-143127 bp Feature: domain Description: AraJ Location: 141946-143104 bp Feature: domain Description: AraJ Location: 141946-143 104 bp Feature: gene Location: 143075-143365 bp Feature: gene Location: 143681-144739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143921-144536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143 921-14453 6 bp Feature: domain Description: GIIM Note: maturase Location: 144590-144737 bp Feature: domain Description: GIIM Note: maturase Location: 144590-14473 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraJ (COG2814), RVT-GII, GIIM (pfam08388)

Seq: RPNB01000081.1 (11755 bp)
Overview 1 RT 1: 2838-5890 bp Neighborhood of RT #1 [2838, 5890] RVT-GII Feature: gene Location: 2838-3110 bp Feature: gene Location: 3325-3468 bp Feature: gene Location: 3572-5395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4310-5000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 310-5000 bp Feature: gene Location: 5426-5596 bp Feature: gene Location: 5696-5890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII