myRT

myRT report for GCA_004004355.1_ASM400435v1

Download annotations/find similar RTs

Seq: RPMZ01000068.1 (23386 bp)
Overview 1 RT 1: 9065-12076 bp Neighborhood of RT #1 [9065, 12246] RVT-GII DDE_Tnp_IS66_C Raffinose_syn Feature: gene Location: 9065-9223 bp Feature: gene Location: 9272-9571 bp Feature: gene Location: 9619-11442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10357-11047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0357-1 1 047 bp Feature: gene Location: 11544-11720 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 11580-11691 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 1 580-1 1 691 bp Feature: gene Location: 11722-12246 bp Feature: domain Description: Raffinose_syn Location: 11794-12076 bp Feature: domain Description: Raffinose_syn Location: 1 1 794-1 2076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_IS66_C (pfam13817), Raffinose_syn (pfam05691)

Seq: RPMZ01000103.1 (1349 bp)
Overview 1 RT 1: 7-1039 bp Neighborhood of RT #1 [7, 1188] RVT-GII GIIM Feature: gene Location: 7-1188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151-769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151-769 bp Feature: domain Description: GIIM Note: maturase Location: 823-1039 bp Feature: domain Description: GIIM Note: maturase Location: 82 3-1039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RPMZ01000081.1 (15905 bp)
Overview 1 RT 1: 1178-7797 bp Neighborhood of RT #1 [1178, 7802] RVT-UG1 Amino_oxidase PRK09182 Feature: gene Location: 1178-1399 bp Feature: gene Location: 1546-1683 bp Feature: gene Location: 1766-5434 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2363-2849 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 23 63 -2849 bp Feature: gene Location: 5446-6693 bp Feature: domain Description: Amino_oxidase Location: 5491-6673 bp Feature: domain Description: Amino_oxidase Location: 5491-6673 bp Feature: gene Location: 6876-7802 bp Feature: domain Description: PRK09182 Location: 6927-7797 bp Feature: domain Description: PRK09182 Location: 6927-7797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1, Amino_oxidase (pfam01593), PRK09182 (DNA polymerase III subunit epsilon; Validated)

Seq: RPMZ01000101.1 (1889 bp)
Overview 1 RT 1: 80-1253 bp Neighborhood of RT #1 [80, 1339] RVT-GII GIIM Feature: gene Location: 80-1339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296-950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296-950 bp Feature: domain Description: GIIM Note: maturase Location: 1031-1253 bp Feature: domain Description: GIIM Note: maturase Location: 1031-1253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)