myRT

myRT report for GCA_004005065.1_ASM400506v1

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Seq: RZUY01000141.1 (14272 bp)
Overview 1 RT 1: 3-2666 bp Neighborhood of RT #1 [3, 2666] RVT-GII GIIM Feature: gene Location: 3-383 bp Feature: gene Location: 677-2200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950-1682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950-1 682 bp Feature: domain Description: GIIM Note: maturase Location: 1757-1955 bp Feature: domain Description: GIIM Note: maturase Location: 1 757-1 955 bp Feature: gene Location: 2287-2493 bp Feature: gene Location: 2499-2666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RZUY01000079.1 (26533 bp)
Overview 1 RT 1: 21805-25687 bp Neighborhood of RT #1 [21805, 25692] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 21805-22521 bp Feature: domain Description: rph Location: 21808-22516 bp Feature: domain Description: rph Location: 2 1808-2 2 516 bp Feature: gene Location: 22572-23228 bp Feature: domain Description: pyrE Location: 22590-23223 bp Feature: domain Description: pyrE Location: 2 2 590-2 32 2 3 bp Feature: gene Location: 23526-24485 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23661-24210 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 3661-2 42 10 bp Feature: gene Location: 24531-25127 bp Feature: domain Description: slmA Location: 24537-25113 bp Feature: domain Description: slmA Location: 2 4537-2 5113 bp Feature: gene Location: 25234-25692 bp Feature: domain Description: dut Location: 25240-25687 bp Feature: domain Description: dut Location: 2 52 40-2 5687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: RZUY01000193.1 (1205 bp)
Overview 1 RT 1: 239-1203 bp Neighborhood of RT #1 [239, 1202] SLATT_5 RVT-UG17 Feature: gene Location: 239-790 bp Feature: domain Description: SLATT_5 Location: 245-761 bp Feature: domain Description: SLATT_5 Location: 245-761 bp Feature: gene Location: 768-1202 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 996-1203 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 996-1203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: RZUY01000067.1 (5684 bp)
Overview 1 RT 1: 3-3809 bp Neighborhood of RT #1 [3, 4036] RVT-UG17 Phage_lysis Peptidase_S74 Feature: gene Location: 3-905 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6-369 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6-369 bp Feature: gene Location: 986-1318 bp Feature: gene Location: 1343-4036 bp Feature: domain Description: Phage_lysis Location: 1436-1580 bp Feature: domain Description: Phage_lysis Location: 14 36-1580 bp Feature: domain Description: Peptidase_S74 Location: 3662-3809 bp Feature: domain Description: Peptidase_S74 Location: 3662-3809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, Phage_lysis (pfam03245), Peptidase_S74 (pfam13884)