myRT

myRT report for GCA_004016835.1_ASM401683v1

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Seq: SAJG01000069.1 (4387 bp)
Overview 1 RT 1: 1-2583 bp Neighborhood of RT #1 [1, 2621] RVT-GII RVT-GII COG3547 Feature: gene Location: 1-318 bp Feature: gene Location: 550-1008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553-856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553-856 bp Feature: gene Location: 1184-1642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1439-1622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 439-1 622 bp Feature: gene Location: 1833-2036 bp Feature: gene Location: 2271-2621 bp Feature: domain Description: COG3547 Location: 2304-2583 bp Feature: domain Description: COG3547 Location: 2304-2583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG3547 (Transposase )

Seq: SAJG01000001.1 (798574 bp)
Overview 1 RT 1: 171355-177433 bp Neighborhood of RT #1 [171355, 177433] GntR RVT-UG12 Feature: gene Location: 171355-172059 bp Feature: domain Description: GntR Location: 171379-171982 bp Feature: domain Description: GntR Location: 171379-171982 bp Feature: gene Location: 173304-174404 bp Feature: gene Location: 174608-175438 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 174992-175331 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 174992 -175331 bp Feature: gene Location: 175393-176370 bp Feature: gene Location: 176525-177433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GntR (pfam00392), RVT-UG12

Seq: SAJG01000034.1 (40512 bp)
Overview 1 RT 1: 1-3039 bp Neighborhood of RT #1 [1, 3039] COG3415 RVT-GII GIIM DDE_3 Feature: gene Location: 1-312 bp Feature: domain Description: COG3415 Location: 4-286 bp Feature: domain Description: COG3 415 Location: 4-286 bp Feature: gene Location: 592-720 bp Feature: gene Location: 927-2186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1143-1797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1143 -1797 bp Feature: domain Description: GIIM Note: maturase Location: 1878-2100 bp Feature: domain Description: GIIM Note: maturase Location: 1878-2100 bp Feature: gene Location: 2240-2755 bp Feature: domain Description: DDE_3 Location: 2270-2648 bp Feature: domain Description: DDE_3 Location: 2270-2648 bp Feature: gene Location: 2833-3039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358)