myRT

myRT report for GCA_004017565.1_ASM401756v1

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Seq: RPJJ01000070.1 (30186 bp)
Overview 1 RT 1: 11174-15486 bp 2 RT 2: 21132-29526 bp Neighborhood of RT #1 [11174, 15512] RVT-GII GIIM COG3415 COG4957 Neighborhood of RT #2 [21132, 29526] RVT-UG20 TPR TPR CHAT Feature: gene Location: 11174-11386 bp Feature: gene Location: 11649-12122 bp Feature: gene Location: 12176-13435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12392-13046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2392-1 3046 bp Feature: domain Description: GIIM Note: maturase Location: 13127-13349 bp Feature: domain Description: GIIM Note: maturase Location: 1 31 27-1 3349 bp Feature: gene Location: 14030-14437 bp Feature: domain Description: COG3415 Location: 14033-14435 bp Feature: domain Description: COG341 5 Location: 1 4033-1 4435 bp Feature: gene Location: 15066-15512 bp Feature: domain Description: COG4957 Location: 15072-15486 bp Feature: domain Description: COG4957 Location: 1 5072-1 5486 bp Feature: gene Location: 21132-23021 bp Feature: gene Location: 23451-23921 bp Feature: gene Location: 23994-25607 bp Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 24342-24840 bp Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 24342-24840 bp Feature: gene Location: 25822-29484 bp Feature: domain Description: TPR Location: 26479-26794 bp Feature: domain Description: TPR Location: 26479-26794 bp Feature: domain Description: TPR Location: 27595-27784 bp Feature: domain Description: TPR Location: 27595-27784 bp Feature: domain Description: CHAT Location: 28738-29392 bp Feature: domain Description: CHAT Location: 28738-29392 bp Feature: gene Location: 29329-29526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3415 (Transposase ), COG4957 (Predicted transcriptional regulator ), RVT-UG20, TPR (smart00028), CHAT (pfam12770)

Seq: RPJJ01000184.1 (1884 bp)
Overview 1 RT 1: 80-1792 bp Neighborhood of RT #1 [80, 1792] RVT-GII GIIM Feature: gene Location: 80-1339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296-950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 96-950 bp Feature: domain Description: GIIM Note: maturase Location: 1031-1247 bp Feature: domain Description: GIIM Note: maturase Location: 1031-12 47 bp Feature: gene Location: 884-1792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)