myRT

myRT report for GCA_004018155.1_ASM401815v1

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Seq: SALP01000108.1 (18163 bp)
Overview 1 RT 1: 5441-9093 bp Neighborhood of RT #1 [5441, 9093] DDE_Tnp_1_4 RVT_N RVT-GII Feature: gene Location: 5441-5935 bp Feature: domain Description: DDE_Tnp_1_4 Location: 5618-5801 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 561 8-5801 bp Feature: gene Location: 6819-6947 bp Feature: gene Location: 7005-7952 bp Feature: domain Description: RVT_N Location: 7176-7416 bp Feature: domain Description: RVT_N Location: 71 76-741 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7464-7914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7464-791 4 bp Feature: gene Location: 8250-8528 bp Feature: gene Location: 8779-9093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_4 (pfam13701), RVT_N (pfam13655), RVT-GII

Seq: SALP01000162.1 (14194 bp)
Overview 1 RT 1: 3639-6783 bp Neighborhood of RT #1 [3639, 6783] COG3547 RVT-GII RVT-GII Feature: gene Location: 3639-3971 bp Feature: domain Description: COG3547 Location: 3645-3966 bp Feature: domain Description: COG3547 Location: 3645-3966 bp Feature: gene Location: 4087-4251 bp Feature: gene Location: 5081-5377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5297-5369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 97-5369 bp Feature: gene Location: 5374-5535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5380-5521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5380-552 1 bp Feature: gene Location: 5545-5787 bp Feature: gene Location: 5794-6783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII

Seq: SALP01000436.1 (3557 bp)
Overview 1 RT 1: 270-2835 bp Neighborhood of RT #1 [270, 2835] Phage_int_SAM_1 INT_RitC_C_like RVT-GII Feature: gene Location: 270-1265 bp Feature: domain Description: Phage_int_SAM_1 Location: 318-552 bp Feature: domain Description: Phage_int_SAM_1 Location: 3 18-552 bp Feature: domain Description: INT_RitC_C_like Location: 651-1185 bp Feature: domain Description: INT_RitC_C_like Location: 651-1185 bp Feature: gene Location: 1369-1965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1378-1588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 78-1588 bp Feature: gene Location: 2288-2455 bp Feature: gene Location: 2491-2835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), RVT-GII

Seq: SALP01000050.1 (27162 bp)
Overview 1 RT 1: 517-4834 bp Neighborhood of RT #1 [517, 4854] GsiA RVT-GII YjgF_YER057c_UK114_family DadA Feature: gene Location: 517-2154 bp Feature: domain Description: GsiA Location: 523-2098 bp Feature: domain Description: GsiA Location: 523-2098 bp Feature: gene Location: 2254-2406 bp Feature: gene Location: 2623-2937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2671-2875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2671-2875 bp Feature: gene Location: 3045-3428 bp Feature: domain Description: YjgF_YER057c_UK114_family Location: 3120-3411 bp Feature: domain Description: YjgF_YER057c_UK114 _family Location: 3120-34 11 bp Feature: gene Location: 3580-4854 bp Feature: domain Description: DadA Location: 3622-4834 bp Feature: domain Description: DadA Location: 3622-4 834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GsiA (COG1123), RVT-GII, YjgF_YER057c_UK114_family (cl10015), DadA (COG0665)