myRT

myRT report for GCA_004019785.1_ASM401978v1

Download annotations/find similar RTs

Seq: SAPB01000069.1 (19664 bp)
Overview 1 RT 1: 15802-19661 bp Neighborhood of RT #1 [15802, 19661] heptsyl_trn_I DDE_3 RVT-GII GIIM Feature: gene Location: 15802-16776 bp Feature: domain Description: heptsyl_trn_I Location: 15808-16750 bp Feature: domain Description: heptsyl_trn_I Location: 1 5808-1 6750 bp Feature: gene Location: 16897-17412 bp Feature: domain Description: DDE_3 Location: 16927-17305 bp Feature: domain Description: DDE_3 Location: 1 6927-1 7305 bp Feature: gene Location: 17466-18674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17631-18285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7631 -1 8285 bp Feature: domain Description: GIIM Note: maturase Location: 18366-18588 bp Feature: domain Description: GIIM Note: maturase Location: 1 8366-1 8588 bp Feature: gene Location: 19458-19661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT heptsyl_trn_I (TIGR02193), DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388)

Seq: SAPB01000001.1 (355392 bp)
Overview 1 RT 1: 20539-26419 bp Neighborhood of RT #1 [20539, 26419] INT_C_like_1 HTH_17 RVT-UNC CoiA Feature: gene Location: 20539-22200 bp Feature: domain Description: INT_C_like_1 Location: 21502-22099 bp Feature: domain Description: INT_C_like_1 Location: 2 1502 -2 2 099 bp Feature: gene Location: 22345-22542 bp Feature: domain Description: HTH_17 Location: 22369-22513 bp Feature: domain Description: HTH_17 Location: 2 2 369-2 2 513 bp Feature: gene Location: 22782-23987 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 23100-23643 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2 3100-2 3643 bp Feature: gene Location: 24211-25272 bp Feature: domain Description: CoiA Location: 24310-24664 bp Feature: domain Description: CoiA Location: 2 4310-2 4664 bp Feature: gene Location: 25715-26419 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_C_like_1 (cd01184), HTH_17 (pfam12728), RVT-UG27/RVT-CRISPR/RVT-GII(RVT-UNC), CoiA (pfam06054)