myRT

myRT report for GCA_004020055.1_ASM402005v1

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Seq: SAPI01000066.1 (17958 bp)
Overview 1 RT 1: 13752-17177 bp Neighborhood of RT #1 [13752, 17557] RVT-GII RVT-GII PRK06526 COG4584 Feature: gene Location: 13752-14000 bp Feature: gene Location: 14025-14252 bp Feature: gene Location: 14289-14747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14544-14727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4544-1 4727 bp Feature: gene Location: 14923-15381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14926-15229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4926-1 5229 bp Feature: gene Location: 15468-16268 bp Feature: domain Description: PRK06526 Location: 15513-16203 bp Feature: domain Description: PRK06526 Location: 1 551 3-1 6203 bp Feature: gene Location: 16268-17557 bp Feature: domain Description: COG4584 Location: 16394-17177 bp Feature: domain Description: COG4584 Location: 1 6394-1 71 77 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK06526 (transposase; Provisional), COG4584 (Transposase )

Seq: SAPI01000001.1 (663062 bp)
Overview 1 RT 1: 83701-90308 bp Neighborhood of RT #1 [83701, 90308] Spo0J RVT-GII GIIM PRK07078 Toprim_3 Feature: gene Location: 83701-84897 bp Feature: gene Location: 85062-87152 bp Feature: domain Description: Spo0J Location: 85107-85860 bp Feature: domain Description: Spo0J Location: 85107-85860 bp Feature: gene Location: 87623-89002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87953-88571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87953-88571 bp Feature: domain Description: GIIM Note: maturase Location: 88622-88847 bp Feature: domain Description: GIIM Note: maturase Location: 8862 2 -88847 bp Feature: gene Location: 89097-90134 bp Feature: domain Description: PRK07078 Location: 89118-89412 bp Feature: domain Description: PRK07078 Location: 89118-89412 bp Feature: domain Description: Toprim_3 Location: 89793-90057 bp Feature: domain Description: Toprim_3 Location: 89793-90057 bp Feature: gene Location: 90162-90308 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Spo0J (COG1475), RVT-GII, GIIM (pfam08388), PRK07078 (hypothetical protein; Validated), Toprim_3 (pfam13362)

Seq: SAPI01000043.1 (41582 bp)
Overview 1 RT 1: 37496-40622 bp Neighborhood of RT #1 [37496, 40622] DDE_3 RVT-GII GIIM Feature: gene Location: 37496-37702 bp Feature: gene Location: 37780-38295 bp Feature: domain Description: DDE_3 Location: 37810-38206 bp Feature: domain Description: DDE_3 Location: 3 7810-3 8206 bp Feature: gene Location: 38349-39608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38565-39219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 8565-3 9219 bp Feature: domain Description: GIIM Note: maturase Location: 39300-39522 bp Feature: domain Description: GIIM Note: maturase Location: 3 93 00-3 9522 bp Feature: gene Location: 39815-39943 bp Feature: gene Location: 40137-40622 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388)