myRT

myRT report for GCA_004020565.1_ASM402056v1

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Seq: SARC01000113.1 (4477 bp)
Overview 1 RT 1: 978-4459 bp Neighborhood of RT #1 [978, 4459] COG3547 RVT-GII Recombinase Zn_ribbon_recom Feature: gene Location: 978-1721 bp Feature: domain Description: COG3547 Location: 1002-1524 bp Feature: domain Description: COG3547 Location: 1 002-1 524 bp Feature: gene Location: 1841-2194 bp Feature: gene Location: 2562-2816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2763-2811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2763-281 1 bp Feature: gene Location: 2827-4110 bp Feature: domain Description: Recombinase Location: 2860-2995 bp Feature: domain Description: Recombinase Location: 2860-2995 bp Feature: domain Description: Zn_ribbon_recom Location: 3046-3223 bp Feature: domain Description: Zn_ribbon_recom Location: 3046-3223 bp Feature: gene Location: 4136-4459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: SARC01000153.1 (2176 bp)
Overview 1 RT 1: 1-1508 bp Neighborhood of RT #1 [1, 1508] RVT-GII Feature: gene Location: 1-483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-367 bp Feature: gene Location: 707-976 bp Feature: gene Location: 1314-1508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SARC01000044.1 (33229 bp)
Overview 1 RT 1: 66-2880 bp Neighborhood of RT #1 [66, 2880] DDE_3 RVT-GII GIIM Feature: gene Location: 66-431 bp Feature: domain Description: DDE_3 Location: 75-327 bp Feature: domain Description: DDE_3 Location: 75-3 27 bp Feature: gene Location: 634-1650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 637-1261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 7-1261 bp Feature: domain Description: GIIM Note: maturase Location: 1342-1564 bp Feature: domain Description: GIIM Note: maturase Location: 13 42-1564 bp Feature: gene Location: 2396-2581 bp Feature: gene Location: 2566-2880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388)