myRT

myRT report for GCA_004023175.1_ASM402317v1

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Seq: RZTF01000242.1 (9999 bp)
Overview 1 RT 1: 3455-9166 bp Neighborhood of RT #1 [3455, 9186] Zn_ribbon_recom Recombinase HTH_17 RVT-GII RVT-GII PinE DDE_Tnp_IS66_C Feature: gene Location: 3455-4249 bp Feature: gene Location: 4742-6064 bp Feature: domain Description: Zn_ribbon_recom Location: 4982-5120 bp Feature: domain Description: Zn_ribbon_recom Location: 4982-51 20 bp Feature: domain Description: Recombinase Location: 5678-5834 bp Feature: domain Description: Recombinase Location: 5678-5834 bp Feature: domain Description: HTH_17 Location: 5843-5981 bp Feature: domain Description: HTH_1 7 Location: 5843-5981 bp Feature: gene Location: 6025-6777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6028-6400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6028-6400 bp Feature: gene Location: 6789-7502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7200-7428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7200-7428 bp Feature: gene Location: 7714-8481 bp Feature: domain Description: PinE Location: 7756-8320 bp Feature: domain Description: PinE Location: 7756-8320 bp Feature: gene Location: 9004-9186 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 9055-9166 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 9055-91 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_ribbon_recom (pfam13408), Recombinase (pfam07508), HTH_17 (pfam12728), RVT-GII, PinE (COG1961), DDE_Tnp_IS66_C (pfam13817)

Seq: RZTF01000044.1 (26296 bp)
Overview 1 RT 1: 15685-21035 bp Neighborhood of RT #1 [15685, 21211] RVT-UG12 DUF87 YjgR Feature: gene Location: 15685-16065 bp Feature: gene Location: 16262-16591 bp Feature: gene Location: 16726-18417 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 17137-17557 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 17137-17557 bp Feature: gene Location: 18520-18822 bp Feature: gene Location: 18959-21211 bp Feature: domain Description: DUF87 Location: 20195-20405 bp Feature: domain Description: DUF87 Location: 2 0195-2 0405 bp Feature: domain Description: YjgR Location: 20651-21035 bp Feature: domain Description: YjgR Location: 2 0651-2 1035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12, DUF87 (pfam01935), YjgR (COG0433)