myRT

myRT report for GCA_004024145.1_ASM402414v1

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Seq: QKOY01000152.1 (385 bp)
Overview 1 RT 1: 3-369 bp Neighborhood of RT #1 [3, 383] RVT-UG14 Feature: gene Location: 3-383 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 192-369 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 1 92-369 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG14

Seq: QKOY01000070.1 (12540 bp)
Overview 1 RT 1: 328-4786 bp Neighborhood of RT #1 [328, 4794] PRK10276 RVT_N RVT-GII GIIM HNHc umuC Feature: gene Location: 328-561 bp Feature: gene Location: 684-818 bp Feature: domain Description: PRK10276 Location: 732-798 bp Feature: domain Description: PRK102 76 Location: 732 -798 bp Feature: gene Location: 1408-3123 bp Feature: domain Description: RVT_N Location: 1462-1705 bp Feature: domain Description: RVT_N Location: 1462 -1705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1750-2401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1750-2 401 bp Feature: domain Description: GIIM Note: maturase Location: 2455-2686 bp Feature: domain Description: GIIM Note: maturase Location: 2 455-2 686 bp Feature: domain Description: HNHc Note: nucleases Location: 2920-3076 bp Feature: domain Description: HNHc Note: nucleases Location: 2 92 0-3076 bp Feature: gene Location: 3197-3493 bp Feature: gene Location: 3523-4794 bp Feature: domain Description: umuC Location: 3526-4786 bp Feature: domain Description: umuC Location: 352 6-4786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), umuC (PRK03609)

Seq: QKOY01000068.1 (16313 bp)
Overview 1 RT 1: 9541-14271 bp Neighborhood of RT #1 [9541, 14336] PHA02517 COG3547 RVT-GII GIIM InsE PHA02517 Feature: gene Location: 9541-9783 bp Feature: domain Description: PHA02517 Location: 9544-9772 bp Feature: domain Description: PHA02517 Location: 9544-9772 bp Feature: gene Location: 9866-10942 bp Feature: domain Description: COG3547 Location: 9905-10826 bp Feature: domain Description: COG3 547 Location: 9905-10826 bp Feature: gene Location: 11484-13007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11757-12489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11757-12489 bp Feature: domain Description: GIIM Note: maturase Location: 12564-12762 bp Feature: domain Description: GIIM Note: maturase Location: 12564-12762 bp Feature: gene Location: 12961-13386 bp Feature: gene Location: 13599-14336 bp Feature: domain Description: InsE Location: 13611-13863 bp Feature: domain Description: InsE Location: 13 611-13 863 bp Feature: domain Description: PHA02517 Location: 13935-14271 bp Feature: domain Description: PHA02517 Location: 13 93 5-14271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), InsE (COG2963)