myRT

myRT report for GCA_004024445.1_ASM402444v1

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Seq: QKOQ01000087.1 (9401 bp)
Overview 1 RT 1: 5496-9344 bp Neighborhood of RT #1 [5496, 9364] SrlE MviM RVT-UG17 SLATT_5 Feature: gene Location: 5496-6476 bp Feature: domain Description: SrlE Location: 5499-6474 bp Feature: domain Description: SrlE Location: 5499-6474 bp Feature: gene Location: 6487-7509 bp Feature: domain Description: MviM Location: 6490-7489 bp Feature: domain Description: MviM Location: 6490-7489 bp Feature: gene Location: 7702-9072 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 7930-8536 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 7930-8536 bp Feature: gene Location: 9062-9364 bp Feature: domain Description: SLATT_5 Location: 9107-9344 bp Feature: domain Description: SLATT_5 Location: 91 07-9344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SrlE (COG3732), MviM (COG0673), RVT-UG17, SLATT_5 (pfam18160)

Seq: QKOQ01000060.1 (27517 bp)
Overview 1 RT 1: 838-5027 bp Neighborhood of RT #1 [838, 5027] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 838-1509 bp Feature: domain Description: Plasmid_stab_B Location: 853-1060 bp Feature: domain Description: Plasmid_stab_B Location: 853-1060 bp Feature: domain Description: Plasmid_stab_B Location: 1165-1372 bp Feature: domain Description: Plasmid_stab_B Location: 1165-1372 bp Feature: gene Location: 1512-2483 bp Feature: domain Description: StbA Location: 1515-2460 bp Feature: domain Description: StbA Location: 1515-2 460 bp Feature: gene Location: 2732-4219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3137-3827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3137-382 7 bp Feature: gene Location: 4270-4503 bp Feature: gene Location: 4632-5027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: QKOQ01000193.1 (443 bp)
Overview 1 RT 1: 3-147 bp Neighborhood of RT #1 [3, 440] RVT-UG10 Feature: gene Location: 3-440 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 15-147 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 15-147 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG10