myRT

myRT report for GCA_004025255.1_ASM402525v1

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Seq: SAZM01000034.1 (462451 bp)
Overview 1 RT 1: 1-1467 bp 2 RT 2: 451026-457870 bp Neighborhood of RT #1 [1, 1467] RVT-GII NagC Neighborhood of RT #2 [451026, 458127] AAA_15 RVT-Retrons HTH_23 Feature: gene Location: 1-129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-1 1 8 bp Feature: gene Location: 204-1265 bp Feature: domain Description: NagC Location: 288-1245 bp Feature: domain Description: NagC Location: 288-1 245 bp Feature: gene Location: 1282-1467 bp Feature: gene Location: 451026-451331 bp Feature: gene Location: 452214-454490 bp Feature: domain Description: AAA_15 Location: 452247-453255 bp Feature: domain Description: AAA_1 5 Location: 452247-453255 bp Feature: gene Location: 454605-455705 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 454785-455319 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 454785-45531 9 bp Feature: gene Location: 456630-457478 bp Feature: gene Location: 457651-458127 bp Feature: domain Description: HTH_23 Location: 457729-457870 bp Feature: domain Description: HTH_23 Location: 457729-457870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, NagC (COG1940), AAA_15 (pfam13175), RVT-Retrons, HTH_23 (pfam13384)

Seq: SAZM01000083.1 (49898 bp)
Overview 1 RT 1: 3-4687 bp Neighborhood of RT #1 [3, 4689] APC_N_CC RVT-UG17 SLATT_5 prfC Feature: gene Location: 3-224 bp Feature: domain Description: APC_N_CC Location: 93-216 bp Feature: domain Description: APC_N_CC Location: 93-2 16 bp Feature: gene Location: 520-1890 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 748-1354 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 748-1354 bp Feature: gene Location: 1868-2572 bp Feature: domain Description: SLATT_5 Location: 2030-2540 bp Feature: domain Description: SLATT_5 Location: 2 030-2 540 bp Feature: gene Location: 3103-4689 bp Feature: domain Description: prfC Location: 3121-4687 bp Feature: domain Description: prfC Location: 312 1-4687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT APC_N_CC (pfam16689), RVT-UG17, SLATT_5 (pfam18160), prfC (TIGR00503)

Seq: SAZM01000006.1 (1190 bp)
Overview 1 RT 1: 1-1185 bp Neighborhood of RT #1 [1, 1187] RVT-GII Feature: gene Location: 1-297 bp Feature: gene Location: 591-1187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SAZM01000007.1 (769 bp)
Overview 1 RT 1: 1-769 bp Neighborhood of RT #1 [1, 768] RVT-GII GIIM Feature: gene Location: 1-768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-505 bp Feature: domain Description: GIIM Note: maturase Location: 580-769 bp Feature: domain Description: GIIM Note: maturase Location: 580-769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)