myRT

myRT report for GCA_004026025.1_ASM402602v1

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Seq: SAZQ01000005.1 (1506 bp)
Overview 1 RT 1: 1-1506 bp Neighborhood of RT #1 [1, 1505] RVT-GII GIIM PHA02517 Feature: gene Location: 1-1023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-505 bp Feature: domain Description: GIIM Note: maturase Location: 580-778 bp Feature: domain Description: GIIM Note: maturase Location: 580-778 bp Feature: gene Location: 1200-1505 bp Feature: domain Description: PHA02517 Location: 1203-1506 bp Feature: domain Description: PHA0251 7 Location: 1 203-1 506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: SAZQ01000004.1 (1190 bp)
Overview 1 RT 1: 1-1185 bp Neighborhood of RT #1 [1, 1187] RVT-GII Feature: gene Location: 1-297 bp Feature: gene Location: 591-1187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SAZQ01000031.1 (462712 bp)
Overview 1 RT 1: 1-1466 bp 2 RT 2: 451132-457976 bp Neighborhood of RT #1 [1, 1466] RVT-GII NagC Neighborhood of RT #2 [451132, 458233] AAA_15 RVT-Retrons HTH_23 Feature: gene Location: 1-129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-118 bp Feature: gene Location: 203-1264 bp Feature: domain Description: NagC Location: 287-1244 bp Feature: domain Description: NagC Location: 287-1244 bp Feature: gene Location: 1281-1466 bp Feature: gene Location: 451132-451437 bp Feature: gene Location: 452320-454596 bp Feature: domain Description: AAA_15 Location: 452353-453361 bp Feature: domain Description: AAA_15 Location: 4523 53 -453 3 61 bp Feature: gene Location: 454711-455811 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 454891-455425 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 454891-455425 bp Feature: gene Location: 456736-457584 bp Feature: gene Location: 457757-458233 bp Feature: domain Description: HTH_23 Location: 457835-457976 bp Feature: domain Description: HTH_23 Location: 45783 5-457976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, NagC (COG1940), AAA_15 (pfam13175), RVT-Retrons, HTH_23 (pfam13384)

Seq: SAZQ01000078.1 (49778 bp)
Overview 1 RT 1: 397-4564 bp Neighborhood of RT #1 [397, 4566] RVT-UG17 SLATT_5 prfC Feature: gene Location: 397-1767 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 625-1231 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 625-1231 bp Feature: gene Location: 1745-2449 bp Feature: domain Description: SLATT_5 Location: 1907-2417 bp Feature: domain Description: SLATT_5 Location: 1907-24 17 bp Feature: gene Location: 2980-4566 bp Feature: domain Description: prfC Location: 2998-4564 bp Feature: domain Description: prfC Location: 2998-4 564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), prfC (TIGR00503)