myRT

myRT report for GCA_004026115.1_ASM402611v1

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Seq: SAZG01000027.1 (84440 bp)
Overview 1 RT 1: 16571-20540 bp Neighborhood of RT #1 [16571, 20767] SLATT_5 RVT-UG17 Peptidase_S74 Feature: gene Location: 16571-16711 bp Feature: gene Location: 16724-17275 bp Feature: domain Description: SLATT_5 Location: 16730-17246 bp Feature: domain Description: SLATT_5 Location: 1 6730-1 7246 bp Feature: gene Location: 17253-18623 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 17481-18087 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 7481 -1 8087 bp Feature: gene Location: 18704-19036 bp Feature: gene Location: 19061-20767 bp Feature: domain Description: Peptidase_S74 Location: 20393-20540 bp Feature: domain Description: Peptidase_S74 Location: 20393-20540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Peptidase_S74 (pfam13884)

Seq: SAZG01000053.1 (47479 bp)
Overview 1 RT 1: 21399-25282 bp Neighborhood of RT #1 [21399, 25287] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 21399-21857 bp Feature: domain Description: dut Location: 21405-21852 bp Feature: domain Description: dut Location: 2 1405-2 1852 bp Feature: gene Location: 21964-22560 bp Feature: domain Description: slmA Location: 21970-22546 bp Feature: domain Description: slmA Location: 2 1970-2 2 546 bp Feature: gene Location: 22606-23565 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22741-23290 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 741-2 32 90 bp Feature: gene Location: 23863-24519 bp Feature: domain Description: pyrE Location: 23881-24514 bp Feature: domain Description: pyrE Location: 2 3881-2 4514 bp Feature: gene Location: 24571-25287 bp Feature: domain Description: rph Location: 24574-25282 bp Feature: domain Description: rph Location: 2 4574-2 52 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: SAZG01000004.1 (4506 bp)
Overview 1 RT 1: 3-3409 bp Neighborhood of RT #1 [3, 3462] PHA02517 RVT-GII GIIM PHA02517 autotrans_barl Feature: gene Location: 3-164 bp Feature: domain Description: PHA02517 Location: 6-99 bp Feature: domain Description: PHA02517 Location: 6-99 bp Feature: gene Location: 756-2279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029-1761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029-1761 bp Feature: domain Description: GIIM Note: maturase Location: 1836-2034 bp Feature: domain Description: GIIM Note: maturase Location: 183 6-203 4 bp Feature: gene Location: 2456-2842 bp Feature: domain Description: PHA02517 Location: 2459-2840 bp Feature: domain Description: PHA02517 Location: 2459-2840 bp Feature: gene Location: 2845-3462 bp Feature: domain Description: autotrans_barl Location: 2968-3409 bp Feature: domain Description: autotrans_barl Location: 2968-3 409 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), autotrans_barl (TIGR01414)