myRT

myRT report for GCA_004028185.1_WSM448

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Seq: SBHX01000151.1 (6484 bp)
Overview 1 RT 1: 5167-6267 bp Neighborhood of RT #1 [5167, 6482] WGR RVT-GII GIIM Feature: gene Location: 5167-5481 bp Feature: domain Description: WGR Location: 5227-5452 bp Feature: domain Description: WGR Location: 5227-5452 bp Feature: gene Location: 5545-5736 bp Feature: gene Location: 5832-6482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5835-5982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5835-5982 bp Feature: domain Description: GIIM Note: maturase Location: 6033-6267 bp Feature: domain Description: GIIM Note: maturase Location: 6033-6267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR (smart00773), RVT-GII, GIIM (pfam08388)

Seq: SBHX01000079.1 (9038 bp)
Overview 1 RT 1: 5868-9036 bp Neighborhood of RT #1 [5868, 9035] TMPK Transposase_mut RVT-GII GIIM Rve Feature: gene Location: 5868-6566 bp Feature: domain Description: TMPK Location: 5871-6459 bp Feature: domain Description: TMPK Location: 5871-6459 bp Feature: gene Location: 7016-7399 bp Feature: domain Description: Transposase_mut Location: 7031-7355 bp Feature: domain Description: Transposase_mut Location: 7031-7355 bp Feature: gene Location: 7770-8339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7782-7887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7782 -7887 bp Feature: domain Description: GIIM Note: maturase Location: 7956-8226 bp Feature: domain Description: GIIM Note: maturase Location: 7956-82 2 6 bp Feature: gene Location: 8392-8526 bp Feature: gene Location: 8550-9035 bp Feature: domain Description: Rve Location: 8577-9036 bp Feature: domain Description: Rve Location: 8577-9036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TMPK (cd01672), Transposase_mut (pfam00872), RVT-GII, GIIM (pfam08388), Rve (COG3316)

Seq: SBHX01000184.1 (3217 bp)
Overview 1 RT 1: 337-3215 bp Neighborhood of RT #1 [337, 3214] RVT_N RVT-GII YkfC WGR_MMR_like Feature: gene Location: 337-627 bp Feature: gene Location: 640-1152 bp Feature: gene Location: 1176-2690 bp Feature: domain Description: RVT_N Location: 1260-1503 bp Feature: domain Description: RVT_N Location: 1260-1503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548-2190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548-2190 bp Feature: domain Description: YkfC Location: 2190-2475 bp Feature: domain Description: YkfC Location: 2190-2475 bp Feature: gene Location: 3041-3214 bp Feature: domain Description: WGR_MMR_like Location: 3107-3215 bp Feature: domain Description: WGR_MMR_like Location: 3 107-3 215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), WGR_MMR_like (cd07996)

Seq: SBHX01000182.1 (1174 bp)
Overview 1 RT 1: 3-939 bp Neighborhood of RT #1 [3, 959] RVT-GII Rve Feature: gene Location: 3-158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-120 bp Feature: gene Location: 211-345 bp Feature: gene Location: 369-959 bp Feature: domain Description: Rve Location: 396-939 bp Feature: domain Description: Rve Location: 396-939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Rve (COG3316)