myRT

myRT report for GCA_004100205.1_ASM410020v1

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Seq: SCGL01000033.1 (33027 bp)
Overview 1 RT 1: 18181-23079 bp Neighborhood of RT #1 [18181, 23079] PRK13704 RVT-GII Intron_maturas2 HNHc PRK10276 Feature: gene Location: 18181-18777 bp Feature: gene Location: 18774-20006 bp Feature: domain Description: PRK13704 Location: 19653-19998 bp Feature: domain Description: PRK1 3704 Location: 1 9653-1 9998 bp Feature: gene Location: 20198-22099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20465-21296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20465-21 296 bp Feature: domain Description: Intron_maturas2 Location: 21410-21668 bp Feature: domain Description: Intron_maturas2 Location: 21 41 0-21 668 bp Feature: domain Description: HNHc Note: nucleases Location: 21842-22004 bp Feature: domain Description: HNHc Note: nucleases Location: 21 842-22004 bp Feature: gene Location: 22457-22876 bp Feature: domain Description: PRK10276 Location: 22496-22862 bp Feature: domain Description: PRK1 0276 Location: 22496-22862 bp Feature: gene Location: 22912-23079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13704 (plasmid SOS inhibition protein A; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: SCGL01000008.1 (185412 bp)
Overview 1 RT 1: 181781-184901 bp Neighborhood of RT #1 [181781, 185128] SLATT_5 RVT-UG17 Peptidase_S74 Feature: gene Location: 181781-181921 bp Feature: gene Location: 181934-182485 bp Feature: domain Description: SLATT_5 Location: 181940-182456 bp Feature: domain Description: SLATT_5 Location: 181940-182 456 bp Feature: gene Location: 182463-183833 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 182691-183297 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 182 691-1832 97 bp Feature: gene Location: 183914-184246 bp Feature: gene Location: 184271-185128 bp Feature: domain Description: Peptidase_S74 Location: 184754-184901 bp Feature: domain Description: Peptidase_S74 Location: 184754-184901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Peptidase_S74 (pfam13884)

Seq: SCGL01000009.1 (184196 bp)
Overview 1 RT 1: 49339-53222 bp Neighborhood of RT #1 [49339, 53227] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49339-49797 bp Feature: domain Description: dut Location: 49345-49792 bp Feature: domain Description: dut Location: 493 45-49792 bp Feature: gene Location: 49904-50500 bp Feature: domain Description: slmA Location: 49910-50486 bp Feature: domain Description: slmA Location: 49910-50486 bp Feature: gene Location: 50546-51505 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50681-51230 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50681-5123 0 bp Feature: gene Location: 51803-52459 bp Feature: domain Description: pyrE Location: 51821-52454 bp Feature: domain Description: pyrE Location: 51821-52454 bp Feature: gene Location: 52511-53227 bp Feature: domain Description: rph Location: 52514-53222 bp Feature: domain Description: rph Location: 52514-53 222 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)