myRT

myRT report for GCA_004100775.1_ASM410077v1

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Seq: SCJC01000015.1 (101695 bp)
Overview 1 RT 1: 98813-100993 bp Neighborhood of RT #1 [98813, 101646] HTH_29 HTH_33 DDE_3 RVT-AbiP2 Feature: gene Location: 98813-99103 bp Feature: gene Location: 99113-100174 bp Feature: domain Description: HTH_29 Location: 99233-99404 bp Feature: domain Description: HTH_29 Location: 99233-99404 bp Feature: domain Description: HTH_33 Location: 99437-99599 bp Feature: domain Description: HTH_33 Location: 99437-99599 bp Feature: domain Description: DDE_3 Location: 99641-100070 bp Feature: domain Description: DDE_3 Location: 99641 -1 00070 bp Feature: gene Location: 100276-101646 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 100537-100993 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 00537-1 00993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2

Seq: SCJC01000062.1 (1329 bp)
Overview 1 RT 1: 2-1328 bp Neighborhood of RT #1 [2, 1327] PHA02517 RVT-GII Feature: gene Location: 2-409 bp Feature: domain Description: PHA02517 Location: 5-344 bp Feature: domain Description: PHA02 517 Location: 5-344 bp Feature: gene Location: 1001-1327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1274-1328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 74-132 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: SCJC01000050.1 (4173 bp)
Overview 1 RT 1: 1996-3925 bp Neighborhood of RT #1 [1996, 4170] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 1996-2400 bp Feature: domain Description: InsE Location: 2026-2362 bp Feature: domain Description: InsE Location: 2026-23 62 bp Feature: gene Location: 2429-2785 bp Feature: domain Description: PHA02517 Location: 2432-2741 bp Feature: domain Description: PHA02517 Location: 243 2-2741 bp Feature: gene Location: 2902-4170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2920-3652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2920-3 652 bp Feature: domain Description: GIIM Note: maturase Location: 3727-3925 bp Feature: domain Description: GIIM Note: maturase Location: 3 727-3 925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: SCJC01000019.1 (90102 bp)
Overview 1 RT 1: 1-1027 bp Neighborhood of RT #1 [1, 1035] RVT-GII PRK10173 PRK10173 Feature: gene Location: 1-252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-94 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-94 bp Feature: gene Location: 291-602 bp Feature: domain Description: PRK10173 Location: 294-513 bp Feature: domain Description: PRK10173 Location: 294 -513 bp Feature: gene Location: 586-1035 bp Feature: domain Description: PRK10173 Location: 589-1027 bp Feature: domain Description: PRK10173 Location: 589-1027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)