myRT

myRT report for GCA_004102805.1_ASM410280v1

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Seq: SCEG01000003.1 (143651 bp)
Overview 1 RT 1: 27805-31707 bp 2 RT 2: 76658-88763 bp Neighborhood of RT #1 [27805, 31707] RVT-UG27 HTH_Hin_like Neighborhood of RT #2 [76658, 88763] DUF1566 RVT-DGRs Feature: gene Location: 27805-27987 bp Feature: gene Location: 28194-29165 bp Feature: gene Location: 29187-30446 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 29373-30006 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 29373-30006 bp Feature: gene Location: 30652-30969 bp Feature: domain Description: HTH_Hin_like Location: 30703-30817 bp Feature: domain Description: HTH_Hin_like Location: 30703-3081 7 bp Feature: gene Location: 31039-31707 bp Feature: gene Location: 76658-83215 bp Feature: gene Location: 83275-83790 bp Feature: gene Location: 83777-85258 bp Feature: domain Description: DUF1566 Location: 83807-84020 bp Feature: domain Description: DUF1 566 Location: 83807-84020 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 84230-84956 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 84230-84956 bp Feature: gene Location: 85271-85921 bp Feature: gene Location: 85983-88763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27, HTH_Hin_like (cd00569), DUF1566 (pfam07603), RVT-DGRs

Seq: SCEG01000011.1 (68324 bp)
Overview 1 RT 1: 21357-33428 bp Neighborhood of RT #1 [21357, 33428] RVT-DGRs Feature: gene Location: 21357-21830 bp Feature: gene Location: 21838-22332 bp Feature: gene Location: 22332-23990 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 22608-23286 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 2 608-2 32 86 bp Feature: gene Location: 24376-32796 bp Feature: gene Location: 32793-33428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: SCEG01000509.1 (383 bp)
Overview 1 RT 1: 3-303 bp Neighborhood of RT #1 [3, 380] RVT-GII Feature: gene Location: 3-380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-3 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SCEG01000026.1 (42420 bp)
Overview 1 RT 1: 30292-33133 bp Neighborhood of RT #1 [30292, 33133] RVT-DGRs Feature: gene Location: 30292-30525 bp Feature: gene Location: 30550-30810 bp Feature: gene Location: 30912-32096 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31128-31725 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31128-31725 bp Feature: gene Location: 32220-32705 bp Feature: gene Location: 32891-33133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: SCEG01000071.1 (9452 bp)
Overview 1 RT 1: 3969-8775 bp Neighborhood of RT #1 [3969, 8840] RVT-GII GIIM lyz_endolysin_autolysin DUF3872 Feature: gene Location: 3969-5048 bp Feature: gene Location: 5137-5784 bp Feature: gene Location: 6131-7711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6641-7259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6641-725 9 bp Feature: domain Description: GIIM Note: maturase Location: 7316-7523 bp Feature: domain Description: GIIM Note: maturase Location: 7316-75 23 bp Feature: gene Location: 7814-8416 bp Feature: domain Description: lyz_endolysin_autolysin Location: 8060-8402 bp Feature: domain Description: lyz_endolysin_autolysin Location: 8060-8402 bp Feature: gene Location: 8337-8840 bp Feature: domain Description: DUF3872 Location: 8388-8775 bp Feature: domain Description: DUF3872 Location: 8388-8775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), lyz_endolysin_autolysin (cd00737), DUF3872 (pfam12988)